About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1915.9688
mRNA.BJAM.scaffold1915.9689RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE
mRNA.BJAM.scaffold1916.9690
mRNA.BJAM.scaffold1916.9691VITELLOGENIN-RELATED
mRNA.BJAM.scaffold1916.9692VITELLOGENIN-RELATED
mRNA.BJAM.scaffold1916.9693KRAB AND ZINC FINGER DOMAIN-CONTAINING
mRNA.BJAM.scaffold1916.9694UNCHARACTERIZED
mRNA.BJAM.scaffold1916.9695CELL CYCLE CHECKPOINT PROTEIN RAD1
mRNA.BJAM.scaffold1916.9696ACYLPYRUVASE
mRNA.BJAM.scaffold1916.9697STEROL DESATURASE-RELATED PROTEIN
mRNA.BJAM.scaffold1917.9698
mRNA.BJAM.scaffold1917.9699
mRNA.BJAM.scaffold1917.9700SH2-SH3 ADAPTOR PROTEIN-RELATED
mRNA.BJAM.scaffold1917.9701L-THREONINE ALDOLASE-RELATED
mRNA.BJAM.scaffold1917.9702DNA-DIRECTED RNA POLYMERASE
mRNA.BJAM.scaffold1917.9703
mRNA.BJAM.scaffold1917.9704PHOSPHATASE AND ACTIN REGULATOR PHACTR
mRNA.BJAM.scaffold1917.9705ABC TRANSPORTER G FAMILY MEMBER 28
mRNA.BJAM.scaffold1917.9706PHOSPHATASE AND ACTIN REGULATOR PHACTR
mRNA.BJAM.scaffold1917.9707
mRNA.BJAM.scaffold1918.9708
mRNA.BJAM.scaffold1918.9709
mRNA.BJAM.scaffold1919.9710
mRNA.BJAM.scaffold1919.9711
mRNA.BJAM.scaffold1919.9712REGULATOR OF G PROTEIN SIGNALING
mRNA.BJAM.scaffold1919.9713AAA-FAMILY ATPASE
mRNA.BJAM.scaffold19194.23206
mRNA.BJAM.scaffold192.1481UBIQUITIN-CONJUGATING ENZYME E2
mRNA.BJAM.scaffold192.1482
mRNA.BJAM.scaffold192.1483FLOTILLIN-RELATED
mRNA.BJAM.scaffold1920.9714DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
mRNA.BJAM.scaffold1920.9715DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2
mRNA.BJAM.scaffold1920.9716
mRNA.BJAM.scaffold1920.9717
mRNA.BJAM.scaffold1920.9718S-ADENOSYLMETHIONINE DECARBOXYLASE
mRNA.BJAM.scaffold1920.9719URIDINE KINASE
mRNA.BJAM.scaffold1920.9720NUCLEAR SPECKLE SPLICING REGULATORY PROTEIN 1
mRNA.BJAM.scaffold1920.9721TRNA-PSEUDOURIDINE SYNTHASE
mRNA.BJAM.scaffold1920.9722
mRNA.BJAM.scaffold1920.9723UNCHARACTERIZED
mRNA.BJAM.scaffold1920.9724NUCLEOPORIN NUP35
mRNA.BJAM.scaffold1920.9725DNA2/NAM7 HELICASE FAMILY
mRNA.BJAM.scaffold1920.9726
mRNA.BJAM.scaffold1920.9727TRANSMEMBRANE PROTEIN 98
mRNA.BJAM.scaffold1920.9728RNA RECOGNITION RRM/RNP DOMAIN
mRNA.BJAM.scaffold1921.9729
mRNA.BJAM.scaffold1921.9730EG:EG0003.4 PROTEIN-RELATED
mRNA.BJAM.scaffold1922.9731COLD SHOCK DOMAIN CONTAINING PROTEINS
mRNA.BJAM.scaffold1922.973260S/50S RIBOSOMAL PROTEIN L6/L9
mRNA.BJAM.scaffold1923.9733HISTONE H4
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