About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1833.9444ALCOHOL DEHYDROGENASE
mRNA.BJAM.scaffold1833.9445GROUP II PYRIDOXAL-5-PHOSPHATE DECARBOXYLASE
mRNA.BJAM.scaffold1835.9446MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold1835.9447UNCHARACTERIZED
mRNA.BJAM.scaffold1835.9448PACHYTENE CHECKPOINT PROTEIN 2
mRNA.BJAM.scaffold1835.9449SPHINGOMYELIN PHOSPHODIESTERASE 4
mRNA.BJAM.scaffold1835.9450ETS
mRNA.BJAM.scaffold1835.9451IMPORTIN BETA
mRNA.BJAM.scaffold1836.9452
mRNA.BJAM.scaffold1836.9453EH DOMAIN
mRNA.BJAM.scaffold1836.9454SR-RELATED CTD ASSOCIATED FACTOR 6
mRNA.BJAM.scaffold1836.9455PRESEQUENCE PROTEASE
mRNA.BJAM.scaffold1836.9456PRESEQUENCE PROTEASE
mRNA.BJAM.scaffold1836.9457
mRNA.BJAM.scaffold1836.9458L-THREONINE 3-DEHYDROGENASE
mRNA.BJAM.scaffold1836.9459PRESEQUENCE PROTEASE
mRNA.BJAM.scaffold1836.9460PRESEQUENCE PROTEASE
mRNA.BJAM.scaffold1836.9461-
mRNA.BJAM.scaffold1836.9462DEOXYNUCLEOSIDE KINASE
mRNA.BJAM.scaffold1837.9463
mRNA.BJAM.scaffold1838.9464
mRNA.BJAM.scaffold1838.9465
mRNA.BJAM.scaffold1838.9466HOMEOBOX PROTEIN NKX
mRNA.BJAM.scaffold1839.9467
mRNA.BJAM.scaffold1839.9468
mRNA.BJAM.scaffold1839.9469
mRNA.BJAM.scaffold1839.9470
mRNA.BJAM.scaffold1839.9471RHO-GTPASE-ACTIVATING PROTEIN 6 FAMILY MEMBER
mRNA.BJAM.scaffold184.1435
mRNA.BJAM.scaffold184.1436ZINC FINGER PROTEIN
mRNA.BJAM.scaffold184.1437KRAB AND ZINC FINGER DOMAIN-CONTAINING
mRNA.BJAM.scaffold1841.9472
mRNA.BJAM.scaffold18436.23202TREHALASE
mRNA.BJAM.scaffold1844.9473
mRNA.BJAM.scaffold1844.9474
mRNA.BJAM.scaffold1844.9475
mRNA.BJAM.scaffold1844.9476
mRNA.BJAM.scaffold1844.9477
mRNA.BJAM.scaffold1844.9478CONTACTIN 5
mRNA.BJAM.scaffold1844.9479IMMUNOGLOBULIN
mRNA.BJAM.scaffold1844.9480MICROFIBRIL-ASSOCIATED GLYCOPROTEIN 3
mRNA.BJAM.scaffold1844.9481
mRNA.BJAM.scaffold1846.9482
mRNA.BJAM.scaffold1846.9483
mRNA.BJAM.scaffold1846.9484
mRNA.BJAM.scaffold1846.9485MYOTONIC DYSTROPHY S/T KINASE-RELATED
mRNA.BJAM.scaffold1846.9486
mRNA.BJAM.scaffold1847.9487
mRNA.BJAM.scaffold185.1438
mRNA.BJAM.scaffold185.1439
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