About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1793.9307OCTANOYLTRANSFERASE
mRNA.BJAM.scaffold1793.9308AP COMPLEX SUBUNIT MU
mRNA.BJAM.scaffold1793.9309NEUROTRANSMITTER GATED ION CHANNEL
mRNA.BJAM.scaffold1794.9310
mRNA.BJAM.scaffold1794.9311
mRNA.BJAM.scaffold1798.9312
mRNA.BJAM.scaffold1798.9313
mRNA.BJAM.scaffold1798.9314
mRNA.BJAM.scaffold17988.23195EUKARYOTIC TRANSLATION INITIATION FACTOR 3, THETA SUBUNIT
mRNA.BJAM.scaffold18.109
mRNA.BJAM.scaffold18.110
mRNA.BJAM.scaffold18.111GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
mRNA.BJAM.scaffold18.112GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
mRNA.BJAM.scaffold18.113
mRNA.BJAM.scaffold18.114DNAJ HOMOLOG SUBFAMILY B MEMBER 11
mRNA.BJAM.scaffold18.115
mRNA.BJAM.scaffold18.116
mRNA.BJAM.scaffold180.1384CALCIUM BINDING PROTEIN
mRNA.BJAM.scaffold180.1385TETRATRICOPEPTIDE REPEAT PROTEIN, TPR
mRNA.BJAM.scaffold180.1386TETRATRICOPEPTIDE REPEAT PROTEIN, TPR
mRNA.BJAM.scaffold180.1387UNCHARACTERIZED
mRNA.BJAM.scaffold180.1388ATP-DEPENDENT RNA AND DNA HELICASE
mRNA.BJAM.scaffold180.1389ORIGIN RECOGNITION COMPLEX SUBUNIT 5
mRNA.BJAM.scaffold180.1390GUANINE NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold180.1391
mRNA.BJAM.scaffold180.1392
mRNA.BJAM.scaffold180.1393REELIN
mRNA.BJAM.scaffold180.1394REELIN
mRNA.BJAM.scaffold180.1395
mRNA.BJAM.scaffold180.1396RE44287P-RELATED
mRNA.BJAM.scaffold180.1397RE44287P-RELATED
mRNA.BJAM.scaffold180.1398
mRNA.BJAM.scaffold180.1399UV-STIMULATED SCAFFOLD PROTEIN A
mRNA.BJAM.scaffold180.1400GTP-BINDING PROTEIN-RELATED
mRNA.BJAM.scaffold180.1401T-CELL LYMPHOMA BREAKPOINT-ASSOCIATED TARGET 1-RELATED
mRNA.BJAM.scaffold180.1402MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17
mRNA.BJAM.scaffold180.1403
mRNA.BJAM.scaffold180.1404PHOSPHATIDYLINOSITOL 3-KINASE REGULATORY SUBUNIT
mRNA.BJAM.scaffold180.1405ACYL-COA SYNTHETASE
mRNA.BJAM.scaffold1801.9315
mRNA.BJAM.scaffold1801.9316ADENYLATE CYCLASE TYPE 1
mRNA.BJAM.scaffold18012.23196UBIQUITIN THIOESTERASE
mRNA.BJAM.scaffold1802.9317
mRNA.BJAM.scaffold1802.93185'-NUCLEOTIDASE-RELATED
mRNA.BJAM.scaffold1802.9319UREA TRANSPORTER
mRNA.BJAM.scaffold1802.9320INTER-ALPHA-TRYPSIN INHIBITOR HEAVY CHAIN FAMILY MEMBER
mRNA.BJAM.scaffold1804.9321
mRNA.BJAM.scaffold1804.9322
mRNA.BJAM.scaffold1804.9323
mRNA.BJAM.scaffold1805.9324G-PROTEIN COUPLED RECEPTOR
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