About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1805.932560S RIBOSOMAL PROTEIN L26 FAMILY MEMBER
mRNA.BJAM.scaffold1806.9326DYNACTIN SUBUNIT 3
mRNA.BJAM.scaffold1806.9327CHYMOTRYPSIN-RELATED
mRNA.BJAM.scaffold1806.9328INACTIVE TYROSINE-PROTEIN KINASE 7
mRNA.BJAM.scaffold1806.9329TYROSINE-PROTEIN PHOSPHATASE C15H7.3-RELATED
mRNA.BJAM.scaffold1806.9330CHYMOTRYPSIN-RELATED
mRNA.BJAM.scaffold1806.9331CHYMOTRYPSIN-RELATED
mRNA.BJAM.scaffold1806.9332ACROSIN-RELATED
mRNA.BJAM.scaffold1806.9333CHYMOTRYPSIN-RELATED
mRNA.BJAM.scaffold1807.9334
mRNA.BJAM.scaffold1807.9335SERINE PROTEASE-RELATED
mRNA.BJAM.scaffold1807.9336
mRNA.BJAM.scaffold1807.9337-
mRNA.BJAM.scaffold1807.9338
mRNA.BJAM.scaffold1807.9339
mRNA.BJAM.scaffold1807.9340
mRNA.BJAM.scaffold1807.9341
mRNA.BJAM.scaffold1807.9342U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 11
mRNA.BJAM.scaffold1807.9343TRANSLATION ELONGATION FACTOR-RELATED
mRNA.BJAM.scaffold1807.9344TRANSLATION ELONGATION FACTOR-RELATED
mRNA.BJAM.scaffold1807.9345
mRNA.BJAM.scaffold1808.9346PLATELET-DERIVED GROWTH FACTOR
mRNA.BJAM.scaffold1808.9347PLATELET-DERIVED GROWTH FACTOR
mRNA.BJAM.scaffold1808.9348PLATELET-DERIVED GROWTH FACTOR
mRNA.BJAM.scaffold1808.9349PLATELET-DERIVED GROWTH FACTOR
mRNA.BJAM.scaffold1808.93514-NITROPHENYLPHOSPHATASE-RELATED
mRNA.BJAM.scaffold1808.9352CELL DIVISION CYCLE 16,23,27
mRNA.BJAM.scaffold1808.9353
mRNA.BJAM.scaffold1808.9354
mRNA.BJAM.scaffold18081.23197CATION-TRANSPORTING ATPASE-RELATED
mRNA.BJAM.scaffold1809.9355
mRNA.BJAM.scaffold1809.9356
mRNA.BJAM.scaffold18090.23198DNAJ-LIKE-2, ISOFORM A-RELATED
mRNA.BJAM.scaffold181.1406FRIZZLED
mRNA.BJAM.scaffold181.1407ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
mRNA.BJAM.scaffold181.1408ORGANIC ANION TRANSPORTER
mRNA.BJAM.scaffold181.1409ORGANIC ANION TRANSPORTER
mRNA.BJAM.scaffold181.1410
mRNA.BJAM.scaffold181.1411GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
mRNA.BJAM.scaffold181.1412GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
mRNA.BJAM.scaffold181.1413GAMMA-INTERFERON INDUCIBLE LYSOSOMAL THIOL REDUCTASE GILT
mRNA.BJAM.scaffold181.1414PROTEIN LLP HOMOLOG
mRNA.BJAM.scaffold181.1415ORGANIC ANION TRANSPORTER
mRNA.BJAM.scaffold181.1416
mRNA.BJAM.scaffold181.141726S PROTEASOME REGULATORY SUBUNIT
mRNA.BJAM.scaffold181.1418RENIN RECEPTOR
mRNA.BJAM.scaffold1810.9357
mRNA.BJAM.scaffold1810.9358RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR AT 64C, ISOFORM A
mRNA.BJAM.scaffold1810.9359
mRNA.BJAM.scaffold1810.9360VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
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