About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1781.9261
mRNA.BJAM.scaffold1781.9262ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN
mRNA.BJAM.scaffold1781.9263LEUKOCYTE RECEPTOR CLUSTER MEMBER 9
mRNA.BJAM.scaffold1781.9264ADHESION REGULATING MOLECULE 1 110 KDA CELL MEMBRANE GLYCOPROTEIN
mRNA.BJAM.scaffold1781.9265LEUKOCYTE RECEPTOR CLUSTER MEMBER 9
mRNA.BJAM.scaffold1781.9266OTU DEUBIQUITINASE WITH LINEAR LINKAGE-SPECIFICITY A-RELATED
mRNA.BJAM.scaffold1781.9267PROTEIN STAR
mRNA.BJAM.scaffold1781.9268PROTEIN STAR
mRNA.BJAM.scaffold1781.9269PROTEIN STAR
mRNA.BJAM.scaffold1782.9270PROTEIN STAR
mRNA.BJAM.scaffold1782.9271
mRNA.BJAM.scaffold17827.23193PROTEASOME SUBUNIT ALPHA/BETA
mRNA.BJAM.scaffold1783.9272
mRNA.BJAM.scaffold1783.9273SHORT-CHAIN DEHYDROGENASE/REDUCTASE
mRNA.BJAM.scaffold1783.9274
mRNA.BJAM.scaffold1785.9275SIDESTEP PROTEIN
mRNA.BJAM.scaffold1786.9276
mRNA.BJAM.scaffold1787.9277
mRNA.BJAM.scaffold1787.9278SCY1-RELATED S/T PROTEIN KINASE-LIKE
mRNA.BJAM.scaffold1787.9279CD59 GLYCOPROTEIN
mRNA.BJAM.scaffold1787.9280FORMIN-LIKE PROTEIN
mRNA.BJAM.scaffold1787.9281
mRNA.BJAM.scaffold1787.9282AMINO ACID TRANSPORTER
mRNA.BJAM.scaffold1787.9283RNA-BINDING MOTIF PROTEIN, X-LINKED 2
mRNA.BJAM.scaffold1787.9284
mRNA.BJAM.scaffold1788.9285
mRNA.BJAM.scaffold1788.9286
mRNA.BJAM.scaffold1788.9287
mRNA.BJAM.scaffold1788.9288
mRNA.BJAM.scaffold1788.9289GCIP-INTERACTING PROTEIN P29
mRNA.BJAM.scaffold1788.9290NUCLEAR RESPIRATORY FACTOR 1
mRNA.BJAM.scaffold1789.9291ETS
mRNA.BJAM.scaffold1789.9292
mRNA.BJAM.scaffold179.1382
mRNA.BJAM.scaffold179.138360S RIBOSOMAL PROTEIN L31
mRNA.BJAM.scaffold1790.9293DEFECTIVE PROBOSCIS EXTENSION RESPONSE DPR -RELATED
mRNA.BJAM.scaffold1790.9294
mRNA.BJAM.scaffold17909.231946-PHOSPHOGLUCONATE DEHYDROGENASE
mRNA.BJAM.scaffold1791.9295STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 3
mRNA.BJAM.scaffold1791.9296CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold1792.9297TUBULIN FOLDING COFACTOR C
mRNA.BJAM.scaffold1792.9298KRUEPPEL-LIKE TRANSCRIPTION FACTOR
mRNA.BJAM.scaffold1792.9299DNA POLYMERASE IOTA
mRNA.BJAM.scaffold1792.9300UNCHARACTERIZED
mRNA.BJAM.scaffold1792.9301PR DOMAIN ZINC FINGER PROTEIN
mRNA.BJAM.scaffold1792.9302
mRNA.BJAM.scaffold1792.9303PROTEIN BRICK1
mRNA.BJAM.scaffold1792.9304NUCLEAR PORE COMPLEX PROTEIN NUP133
mRNA.BJAM.scaffold1793.9305UNCHARACTERIZED
mRNA.BJAM.scaffold1793.9306
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