About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1810.9361TRANSCRIPTION TERMINATION FACTOR 2-RELATED
mRNA.BJAM.scaffold1810.9362
mRNA.BJAM.scaffold1810.9363
mRNA.BJAM.scaffold1811.9364MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED
mRNA.BJAM.scaffold1811.9365RE42071P
mRNA.BJAM.scaffold1811.9366RE42071P
mRNA.BJAM.scaffold1811.9367RRNA METHYLTRANSFERASE 1, MITOCHONDRIAL
mRNA.BJAM.scaffold1811.9368VESICLE-TRAFFICKING PROTEIN SEC22B
mRNA.BJAM.scaffold1811.9369
mRNA.BJAM.scaffold1811.9370FERROCHELATASE
mRNA.BJAM.scaffold1811.9371PROTEIN VAV
mRNA.BJAM.scaffold1811.9372PROTEIN VAV
mRNA.BJAM.scaffold1811.9373PROTEIN VAV
mRNA.BJAM.scaffold1811.9374TOLL-LIKE RECEPTOR
mRNA.BJAM.scaffold1812.9375TRANSCRIPTION FACTOR COE FAMILY MEMBER
mRNA.BJAM.scaffold1813.9376-
mRNA.BJAM.scaffold1813.9377GBP PROTEIN
mRNA.BJAM.scaffold1813.9378CALCIUM BINDING PROTEINS
mRNA.BJAM.scaffold1813.9379UBIQUITIN CARBOXYL-TERMINAL HYDROLASE
mRNA.BJAM.scaffold1813.9380
mRNA.BJAM.scaffold1813.9381NADH-UBIQUINONE OXIDOREDUCTASE B8 SUBUNIT
mRNA.BJAM.scaffold1813.9382PYRUVATE DEHYDROGENASE KINASE
mRNA.BJAM.scaffold1813.9383ALPHA-AMYLASE FAMILY MEMBER
mRNA.BJAM.scaffold1813.9384
mRNA.BJAM.scaffold1814.9385CWF19, CELL CYCLE CONTROL PROTEIN
mRNA.BJAM.scaffold1814.9386RING FINGER PROTEIN 31-RELATED
mRNA.BJAM.scaffold1814.9387RING FINGER PROTEIN 31-RELATED
mRNA.BJAM.scaffold1814.9388
mRNA.BJAM.scaffold1815.9389
mRNA.BJAM.scaffold1815.9390CADHERIN-87A
mRNA.BJAM.scaffold1815.9391
mRNA.BJAM.scaffold1815.9392CADHERIN-87A
mRNA.BJAM.scaffold1815.9393
mRNA.BJAM.scaffold1815.9394DYNAMIN
mRNA.BJAM.scaffold1816.9395
mRNA.BJAM.scaffold1816.9396
mRNA.BJAM.scaffold1816.9397PROTEIN CBG20824
mRNA.BJAM.scaffold1817.9398-
mRNA.BJAM.scaffold1817.9399
mRNA.BJAM.scaffold1817.9400
mRNA.BJAM.scaffold1817.9401
mRNA.BJAM.scaffold18184.23199
mRNA.BJAM.scaffold1819.9402
mRNA.BJAM.scaffold182.1419FORKHEAD BOX PROTEIN BINIOU
mRNA.BJAM.scaffold182.1420
mRNA.BJAM.scaffold182.1421GATOR COMPLEX PROTEIN WDR24
mRNA.BJAM.scaffold182.1422PROTEIN ODR-4 HOMOLOG
mRNA.BJAM.scaffold182.1423CASPASE REGULATOR, RING FINGER DOMAIN-CONTAINING
mRNA.BJAM.scaffold1820.9403
mRNA.BJAM.scaffold1821.9404-
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