About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1821.9405-
mRNA.BJAM.scaffold1821.9406-
mRNA.BJAM.scaffold1821.9407GLYCOSIDASE FAMILY 31
mRNA.BJAM.scaffold1822.9408
mRNA.BJAM.scaffold1822.9409
mRNA.BJAM.scaffold1822.9410ZINC METALLOPROTEASE FAMILY M13 NEPRILYSIN-RELATED
mRNA.BJAM.scaffold1822.9411SCAFFOLD ATTACHMENT FACTOR B-RELATED
mRNA.BJAM.scaffold1822.9413
mRNA.BJAM.scaffold1822.9414
mRNA.BJAM.scaffold1822.9415
mRNA.BJAM.scaffold1822.9416LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL
mRNA.BJAM.scaffold1822.9417LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL
mRNA.BJAM.scaffold18223.23200
mRNA.BJAM.scaffold1826.9418SERINE/THREONINE-PROTEIN PHOSPHATASE PP2A-RELATED
mRNA.BJAM.scaffold1826.9419-
mRNA.BJAM.scaffold1826.9420
mRNA.BJAM.scaffold1826.9421ANKYRIN DOMAIN-CONTAINING
mRNA.BJAM.scaffold1826.9423
mRNA.BJAM.scaffold1826.9424
mRNA.BJAM.scaffold1826.9425
mRNA.BJAM.scaffold1828.9426VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG
mRNA.BJAM.scaffold1828.9427TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN
mRNA.BJAM.scaffold1828.9428ALPHA- AND GAMMA-ADAPTIN-BINDING PROTEIN P34
mRNA.BJAM.scaffold1828.9429CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3
mRNA.BJAM.scaffold1828.9430CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 3
mRNA.BJAM.scaffold1828.9431NUCLEOPLASMIN
mRNA.BJAM.scaffold1829.9432GUANINE NUCLEOTIDE EXCHANGE FACTOR
mRNA.BJAM.scaffold1829.9433
mRNA.BJAM.scaffold1829.9434
mRNA.BJAM.scaffold1829.9435
mRNA.BJAM.scaffold183.1424BTB/POZ DOMAIN-CONTAINING PROTEIN 10-RELATED
mRNA.BJAM.scaffold183.1425
mRNA.BJAM.scaffold183.1426
mRNA.BJAM.scaffold183.1427STEROIDOGENIC ACUTE REGULATORY PROTEIN, MITOCHONDRIAL
mRNA.BJAM.scaffold183.1428STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE
mRNA.BJAM.scaffold183.1429
mRNA.BJAM.scaffold183.1430FLAVIN MONOAMINE OXIDASE
mRNA.BJAM.scaffold183.1431DNA REPLICATION-RELATED ELEMENT FACTOR, ISOFORM A
mRNA.BJAM.scaffold183.1432OVARIAN CARCINOMA ANTIGEN CA125-RELATED
mRNA.BJAM.scaffold183.1433MAKORIN-RELATED
mRNA.BJAM.scaffold183.1434GDP-L-FUCOSE SYNTHASE
mRNA.BJAM.scaffold1830.9436TRANSMEMBRANE CHANNEL-RELATED
mRNA.BJAM.scaffold1830.9437TRANSMEMBRANE CHANNEL-RELATED
mRNA.BJAM.scaffold1830.9438
mRNA.BJAM.scaffold1830.9439INTEGRAL TRANSMEMBRANE PROTEIN 2
mRNA.BJAM.scaffold1830.9440ECTO-NOX DISULFIDE-THIOL EXCHANGER
mRNA.BJAM.scaffold1830.9441
mRNA.BJAM.scaffold1831.9442UNCHARACTERIZED
mRNA.BJAM.scaffold1832.9443
mRNA.BJAM.scaffold18329.23201MASK PROTEIN
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