About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1727.9089BIOTINIDASE-RELATED
mRNA.BJAM.scaffold1727.9090
mRNA.BJAM.scaffold1727.9091EXOSOME COMPLEX COMPONENT
mRNA.BJAM.scaffold1727.9092E3 UBIQUITIN-PROTEIN LIGASE UBR5
mRNA.BJAM.scaffold1727.9093BIOTINIDASE-RELATED
mRNA.BJAM.scaffold1727.9094BIOTINIDASE-RELATED
mRNA.BJAM.scaffold1727.9095DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11
mRNA.BJAM.scaffold1727.9096DEHYDROGENASE/REDUCTASE SDR FAMILY MEMBER 11
mRNA.BJAM.scaffold1727.9097DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED
mRNA.BJAM.scaffold1727.9098DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED
mRNA.BJAM.scaffold1727.9099ZINC FINGER PROTEIN 277
mRNA.BJAM.scaffold1729.9100
mRNA.BJAM.scaffold1729.9101
mRNA.BJAM.scaffold1729.9102
mRNA.BJAM.scaffold1729.9103
mRNA.BJAM.scaffold1729.9104RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
mRNA.BJAM.scaffold1729.9105UNCHARACTERIZED
mRNA.BJAM.scaffold1729.9106
mRNA.BJAM.scaffold17297.23181RIBOSOME BIOGENESIS PROTEIN
mRNA.BJAM.scaffold173.1361
mRNA.BJAM.scaffold1730.9107ALPHA KINASE/ELONGATION FACTOR 2 KINASE
mRNA.BJAM.scaffold1730.9108ALPHA KINASE/ELONGATION FACTOR 2 KINASE
mRNA.BJAM.scaffold1730.9109
mRNA.BJAM.scaffold1730.9110
mRNA.BJAM.scaffold1730.9111
mRNA.BJAM.scaffold1731.9112
mRNA.BJAM.scaffold17313.23182
mRNA.BJAM.scaffold17330.23183ER LUMEN PROTEIN RETAINING RECEPTOR
mRNA.BJAM.scaffold17333.23184
mRNA.BJAM.scaffold1734.9113
mRNA.BJAM.scaffold1735.91141,4-ALPHA-GLUCAN-BRANCHING ENZYME
mRNA.BJAM.scaffold1735.9115ACYL-COENZYME A THIOESTERASE-RELATED
mRNA.BJAM.scaffold1735.9116UNCHARACTERIZED
mRNA.BJAM.scaffold1735.9117HOMEOBOX PROTEIN MSX
mRNA.BJAM.scaffold1735.9118HOMEOBOX PROTEIN MSX
mRNA.BJAM.scaffold1735.9119
mRNA.BJAM.scaffold1737.9120
mRNA.BJAM.scaffold1737.9121UNCHARACTERIZED
mRNA.BJAM.scaffold1737.9122
mRNA.BJAM.scaffold1737.9123
mRNA.BJAM.scaffold1737.9124DISCOIDIN, CUB, EGF, LAMININ , AND ZINC METALLOPROTEASE DOMAIN CONTAINING
mRNA.BJAM.scaffold1737.9125ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold1738.9126
mRNA.BJAM.scaffold1738.9127RFX TRANSCRIPTION FACTOR FAMILY
mRNA.BJAM.scaffold1738.9128
mRNA.BJAM.scaffold1738.9129
mRNA.BJAM.scaffold1738.9130
mRNA.BJAM.scaffold1739.9131ATP-DEPENDENT RNA HELICASE RHLE-RELATED
mRNA.BJAM.scaffold1739.91323'-5' EXORIBONUCLEASE CSL4-RELATED
mRNA.BJAM.scaffold174.1362SCAVENGER RECEPTOR CLASS B TYPE-1 SR-B1
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