About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1666.8883AFADIN
mRNA.BJAM.scaffold1666.8884AFADIN
mRNA.BJAM.scaffold1666.8885CYCLIC AMP RESPONSE ELEMENT-BINDING PROTEIN A
mRNA.BJAM.scaffold1666.8886
mRNA.BJAM.scaffold1666.8887DENN DOMAIN-CONTAINING PROTEIN 4
mRNA.BJAM.scaffold1666.8888MYOTUBULARIN-RELATED
mRNA.BJAM.scaffold1666.8889
mRNA.BJAM.scaffold1666.8890
mRNA.BJAM.scaffold1666.8891MYOTUBULARIN-RELATED
mRNA.BJAM.scaffold1666.8892PROTEIN KINASE C, MU
mRNA.BJAM.scaffold1666.8893FRIEND OF GATA2-RELATED
mRNA.BJAM.scaffold1667.8894
mRNA.BJAM.scaffold1667.8895
mRNA.BJAM.scaffold1667.8896CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold1667.8897
mRNA.BJAM.scaffold1668.8898
mRNA.BJAM.scaffold1668.8899RAS GTPASE-RELATED
mRNA.BJAM.scaffold1668.8900RAS GTPASE-RELATED
mRNA.BJAM.scaffold1668.8901
mRNA.BJAM.scaffold1668.8902BNIP - RELATED
mRNA.BJAM.scaffold1669.8903
mRNA.BJAM.scaffold1669.8904CORONIN
mRNA.BJAM.scaffold1669.8905SUCCINATE DEHYDROGENASE CYTOCHROME B560 SUBUNIT
mRNA.BJAM.scaffold1669.8906
mRNA.BJAM.scaffold1669.8907ENOS INTERACTING PROTEIN
mRNA.BJAM.scaffold1669.8908SPLICING FACTOR 3B SUBUNIT 4
mRNA.BJAM.scaffold1669.8909CALCIUM-INDEPENDENT PHOSPHOLIPASE A2 IPLA2 -RELATED
mRNA.BJAM.scaffold167.1328TRANSPOSASE-RELATED
mRNA.BJAM.scaffold167.1329CYTOSOLIC CARBOXYPEPTIDASE
mRNA.BJAM.scaffold167.1330CYTOSOLIC CARBOXYPEPTIDASE
mRNA.BJAM.scaffold167.1331PRE-MRNA SPLICING FACTOR
mRNA.BJAM.scaffold167.1332UNCHARACTERIZED
mRNA.BJAM.scaffold167.1333BCS1 AAA-TYPE ATPASE
mRNA.BJAM.scaffold167.1334T-CELL ACTIVATION RHO GTPASE ACTIVATING PROTEIN-RELATED
mRNA.BJAM.scaffold167.13351-ACYLGLYCEROL-3-PHOSPHATE ACYLTRANSFERASE-RELATED
mRNA.BJAM.scaffold167.1336
mRNA.BJAM.scaffold167.1337KEREN-RELATED
mRNA.BJAM.scaffold167.1338SMR DOMAIN-CONTAINING PROTEIN YPL199C
mRNA.BJAM.scaffold167.1339UNCHARACTERIZED
mRNA.BJAM.scaffold167.1340
mRNA.BJAM.scaffold167.1341ACYL-COA SYNTHETASE
mRNA.BJAM.scaffold1671.8910STRUCTURAL CONTITUENT OF CUTICLE
mRNA.BJAM.scaffold1671.8911HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED
mRNA.BJAM.scaffold1671.8912CARBOHYDRATE SULFOTRANSFERASE
mRNA.BJAM.scaffold1671.8913CARBOHYDRATE SULFOTRANSFERASE
mRNA.BJAM.scaffold1671.8914ACYL-MALONYL CONDENSING ENZYME-RELATED
mRNA.BJAM.scaffold1671.8915OVARIAN-SPECIFIC SERINE/THREONINE-PROTEIN KINASE LOK-RELATED
mRNA.BJAM.scaffold1671.8916
mRNA.BJAM.scaffold1672.8917
mRNA.BJAM.scaffold16739.23172
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