About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1650.8785
mRNA.BJAM.scaffold1651.8786
mRNA.BJAM.scaffold1651.8787PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold1651.8788PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold1651.8789PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold1651.8790PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold1651.8791PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold1651.8792PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold1651.8793PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold1651.8794PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold1651.8795PROTEASE FAMILY M28 PLASMA GLUTAMATE CARBOXYPEPTIDASE-RELATED
mRNA.BJAM.scaffold1651.8796
mRNA.BJAM.scaffold1652.87972-OXOGLUTARATE AND IRON-DEPENDENT OXYGENASE DOMAIN-CONTAINING PROTEIN 2
mRNA.BJAM.scaffold1652.8798EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEIN
mRNA.BJAM.scaffold1652.8799
mRNA.BJAM.scaffold1652.8800TUBULIN POLYGLUTAMYLASE
mRNA.BJAM.scaffold1652.8801
mRNA.BJAM.scaffold1652.8802HERMANSKY-PUDLAK SYNDROME PROTEIN 1
mRNA.BJAM.scaffold1652.8803PHOSPHATIDYLGLYCEROPHOSPHATASE AND PROTEIN-TYROSINE PHOSPHATASE 1
mRNA.BJAM.scaffold1652.8804BLR2807 PROTEIN
mRNA.BJAM.scaffold1652.8805
mRNA.BJAM.scaffold1653.8806
mRNA.BJAM.scaffold1653.8807CELL DEATH ACTIVATOR CIDE
mRNA.BJAM.scaffold1653.8808STRIATED MUSCLE ACTIVATOR OF RHO-DEPENDENT SIGNALING-RELATED
mRNA.BJAM.scaffold1653.8809ACROSIN-RELATED
mRNA.BJAM.scaffold1653.8810ACROSIN-RELATED
mRNA.BJAM.scaffold1653.8811TRYPSIN-RELATED
mRNA.BJAM.scaffold1653.8812GLOBIN-LIKE PROTEIN
mRNA.BJAM.scaffold1653.8813OS02G0815200 PROTEIN
mRNA.BJAM.scaffold1654.8814
mRNA.BJAM.scaffold1654.8815UBIQUITIN THIOESTERASE
mRNA.BJAM.scaffold1654.8816PATCHED-RELATED
mRNA.BJAM.scaffold1654.8817ALDO/KETO REDUCTASE
mRNA.BJAM.scaffold1654.8818
mRNA.BJAM.scaffold1654.8819ALDO/KETO REDUCTASE
mRNA.BJAM.scaffold1654.88202,5-DIKETO-D-GLUCONIC ACID REDUCTASE
mRNA.BJAM.scaffold1654.88212,5-DIKETO-D-GLUCONIC ACID REDUCTASE
mRNA.BJAM.scaffold1654.8822ALDO/KETO REDUCTASE
mRNA.BJAM.scaffold1654.8823
mRNA.BJAM.scaffold1654.8825ALDO/KETO REDUCTASE
mRNA.BJAM.scaffold1654.88262,5-DIKETO-D-GLUCONIC ACID REDUCTASE
mRNA.BJAM.scaffold1655.8827PEROXISOMAL TARGETING SIGNAL 2 RECEPTOR
mRNA.BJAM.scaffold1655.8828EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER
mRNA.BJAM.scaffold1655.8829RESPIRATORY NITRATE REDUCTASE
mRNA.BJAM.scaffold1655.8830OXIDOREDUCTASE-LIKE DOMAIN-CONTAINING PROTEIN 1
mRNA.BJAM.scaffold1655.8831ZINC FINGER PROTEIN
mRNA.BJAM.scaffold1655.8832
mRNA.BJAM.scaffold1655.8833
mRNA.BJAM.scaffold1655.8834CONTACTIN 5
mRNA.BJAM.scaffold1655.8835CARBOHYDRATE SULFOTRANSFERASE
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