About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold160.1271
mRNA.BJAM.scaffold160.1272DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
mRNA.BJAM.scaffold160.1273
mRNA.BJAM.scaffold160.1274
mRNA.BJAM.scaffold160.1275SERINE-THREONINE PROTEIN KINASE
mRNA.BJAM.scaffold160.1276
mRNA.BJAM.scaffold160.1277
mRNA.BJAM.scaffold1600.8582
mRNA.BJAM.scaffold1600.8583
mRNA.BJAM.scaffold1601.8584
mRNA.BJAM.scaffold1601.8585BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST
mRNA.BJAM.scaffold1601.8586RAGULATOR COMPLEX PROTEIN LAMTOR5
mRNA.BJAM.scaffold1601.8587DNA REPAIR PROTEIN RAD51 HOMOLOG 3 RAD51C
mRNA.BJAM.scaffold1601.8588DNA REPAIR PROTEIN XRCC3
mRNA.BJAM.scaffold16013.23163
mRNA.BJAM.scaffold1602.8589
mRNA.BJAM.scaffold1603.8590
mRNA.BJAM.scaffold1603.8591
mRNA.BJAM.scaffold1604.8592FMRFAMIDE RECEPTOR-RELATED
mRNA.BJAM.scaffold1604.8593FMRFAMIDE RECEPTOR-RELATED
mRNA.BJAM.scaffold1605.8594
mRNA.BJAM.scaffold1605.8595SERINE/THREONINE-PROTEIN KINASE
mRNA.BJAM.scaffold1606.8596
mRNA.BJAM.scaffold1608.8597
mRNA.BJAM.scaffold1608.8598ARYL HYDROCARBON RECEPTOR
mRNA.BJAM.scaffold1608.8599LIPASE MATURATION FACTOR
mRNA.BJAM.scaffold1608.8600LIPASE MATURATION FACTOR
mRNA.BJAM.scaffold1608.8601ACTIN
mRNA.BJAM.scaffold1608.8602
mRNA.BJAM.scaffold1608.8603CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1608.8604
mRNA.BJAM.scaffold1608.8606CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1608.8607CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1608.8608CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1608.8609CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1608.8610
mRNA.BJAM.scaffold1608.8611CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1608.8612CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1608.8614CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1608.8616CYSTEINE PROTEASE FAMILY C1-RELATED
mRNA.BJAM.scaffold1609.8617
mRNA.BJAM.scaffold1609.8618TRINUCLEOTIDE REPEAT-CONTAINING GENE 6
mRNA.BJAM.scaffold1609.8619
mRNA.BJAM.scaffold1609.8620CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
mRNA.BJAM.scaffold1609.8621CHLORIDE CHANNEL PROTEIN CLC FAMILY MEMBER
mRNA.BJAM.scaffold161.1278
mRNA.BJAM.scaffold1610.8622DYNEIN ASSEMBLY FACTOR 5, AXONEMAL
mRNA.BJAM.scaffold1610.8623TRANSFORMING ACIDIC COILED-COIL CONTAINING PROTEIN 1/2
mRNA.BJAM.scaffold1610.8624N-ACETYLNEURAMINATE SYNTHASE
mRNA.BJAM.scaffold1610.8625N-ACETYLNEURAMINATE SYNTHASE
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