About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold1631.8710CYTOCHROME P450
mRNA.BJAM.scaffold1631.8711SMAD
mRNA.BJAM.scaffold1633.8712NEPHRIN
mRNA.BJAM.scaffold1633.8713NEPHRIN
mRNA.BJAM.scaffold1634.8714LAMIN DM0-RELATED
mRNA.BJAM.scaffold1634.8715ADAMTS A DISINTEGRIN AND METALLOPROTEASE WITH THROMBOSPONDIN MOTIFS PROTEASE
mRNA.BJAM.scaffold1634.8716PROTEASE M50 MEMBRANE-BOUND TRANSCRIPTION FACTOR SITE 2 PROTEASE
mRNA.BJAM.scaffold1634.8717PEPTIDYLPROLYL ISOMERASE
mRNA.BJAM.scaffold1634.8718DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED
mRNA.BJAM.scaffold1634.8719DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED
mRNA.BJAM.scaffold1634.8720DEHYDROGENASES, SHORT CHAIN
mRNA.BJAM.scaffold1634.8721PEROXISOMAL MULTIFUNCTIONAL ENZYME TYPE 2-RELATED
mRNA.BJAM.scaffold1634.8722
mRNA.BJAM.scaffold16356.23165
mRNA.BJAM.scaffold1636.8723
mRNA.BJAM.scaffold1637.8724SCAVENGER RECEPTOR CLASS F
mRNA.BJAM.scaffold1637.8725TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED
mRNA.BJAM.scaffold1638.8726DNA-DAMAGE-INDUCIBLE TRANSCRIPT 4 PROTEIN DDIT4
mRNA.BJAM.scaffold1638.8727
mRNA.BJAM.scaffold1638.8728
mRNA.BJAM.scaffold1638.8729PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN
mRNA.BJAM.scaffold1638.8730PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS W PROTEIN
mRNA.BJAM.scaffold1638.8731
mRNA.BJAM.scaffold1638.8732
mRNA.BJAM.scaffold1639.8733SEPIAPTERIN REDUCTASE
mRNA.BJAM.scaffold1639.8734
mRNA.BJAM.scaffold1639.8735PENTRAXIN
mRNA.BJAM.scaffold1639.8736NUCLEAR EXPORT MEDIATOR FACTOR NEMF
mRNA.BJAM.scaffold1639.8737NUCLEAR EXPORT MEDIATOR FACTOR NEMF
mRNA.BJAM.scaffold16393.23166DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2
mRNA.BJAM.scaffold164.1301FARNESYL-PYROPHOSPHATE SYNTHETASE
mRNA.BJAM.scaffold164.1302DNA TOPOISOMERASE/GYRASE
mRNA.BJAM.scaffold164.1303
mRNA.BJAM.scaffold164.1304UNCHARACTERIZED
mRNA.BJAM.scaffold164.1305UNCHARACTERIZED
mRNA.BJAM.scaffold164.1306
mRNA.BJAM.scaffold164.1307RIBOSOMAL PROTEIN S6 KINASE
mRNA.BJAM.scaffold164.1308SERINE/THREONINE-PROTEIN KINASE
mRNA.BJAM.scaffold164.1309
mRNA.BJAM.scaffold164.1310POTASSIUM CHANNEL, SUBFAMILY K
mRNA.BJAM.scaffold164.1311NITRIC OXIDE SYNTHASE-RELATED
mRNA.BJAM.scaffold164.1312NITRIC OXIDE SYNTHASE-RELATED
mRNA.BJAM.scaffold1640.8738
mRNA.BJAM.scaffold1640.8739SERINE/THREONINE-PROTEIN KINASE
mRNA.BJAM.scaffold1641.8740MULTIPLE PDZ DOMAIN PROTEIN
mRNA.BJAM.scaffold1641.8741MULTIPLE PDZ DOMAIN PROTEIN
mRNA.BJAM.scaffold1641.8742MULTIPLE PDZ DOMAIN PROTEIN
mRNA.BJAM.scaffold1641.8743MULTIPLE PDZ DOMAIN PROTEIN
mRNA.BJAM.scaffold1641.8744
mRNA.BJAM.scaffold1642.8745AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED
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