About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold16893.23176
mRNA.BJAM.scaffold169.1344UNCHARACTERIZED
mRNA.BJAM.scaffold169.1345BEAT PROTEIN
mRNA.BJAM.scaffold1691.8966
mRNA.BJAM.scaffold1693.8967PROTEIN BARK BEETLE
mRNA.BJAM.scaffold1693.8968
mRNA.BJAM.scaffold1693.8969PROTEIN BARK BEETLE
mRNA.BJAM.scaffold1693.8970D-AMINO ACID OXIDASE
mRNA.BJAM.scaffold1693.8971THREONINE SYNTHASE FAMILY MEMBER
mRNA.BJAM.scaffold1693.8972
mRNA.BJAM.scaffold1693.8974
mRNA.BJAM.scaffold1693.8976UNCHARACTERIZED
mRNA.BJAM.scaffold1693.8977AMPLIFIED IN BREAST CANCER 2-RELATED
mRNA.BJAM.scaffold1693.8978AMPLIFIED IN BREAST CANCER 2-RELATED
mRNA.BJAM.scaffold1693.8979MAP/MICROTUBULE AFFINITY-REGULATING KINASE
mRNA.BJAM.scaffold16933.23177RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED
mRNA.BJAM.scaffold1694.89802-HACID_DH_C DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold1694.8981
mRNA.BJAM.scaffold1695.8982EIF-1A
mRNA.BJAM.scaffold16953.23178
mRNA.BJAM.scaffold1696.8983SI:CH211-201H21.5-RELATED
mRNA.BJAM.scaffold1697.8984CXC DOMAIN-CONTAINING PROTEIN-RELATED
mRNA.BJAM.scaffold17.100IG-LIKE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold17.101IG-LIKE DOMAIN-CONTAINING PROTEIN
mRNA.BJAM.scaffold17.102CONTACTIN 5
mRNA.BJAM.scaffold17.103
mRNA.BJAM.scaffold17.104
mRNA.BJAM.scaffold17.105TRANSIENT RECEPTOR POTENTIAL CHANNEL
mRNA.BJAM.scaffold17.106
mRNA.BJAM.scaffold17.107NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE
mRNA.BJAM.scaffold17.108NH 3 /GLUTAMINE-DEPENDENT NAD + SYNTHETASE
mRNA.BJAM.scaffold170.1346PENTATRICOPEPTIDE REPEAT DOMAIN-CONTAINING PROTEIN 3
mRNA.BJAM.scaffold170.1347MITOCHONDRIAL CARRIER PROTEIN RIM2
mRNA.BJAM.scaffold170.1348SODIUM/HYDROGEN EXCHANGER
mRNA.BJAM.scaffold170.1349SODIUM/HYDROGEN EXCHANGER
mRNA.BJAM.scaffold170.135060S RIBOSOMAL PROTEIN L31
mRNA.BJAM.scaffold170.1351CONDENSIN COMPLEX SUBUNIT 2
mRNA.BJAM.scaffold170.1352CONDENSIN COMPLEX SUBUNIT 2
mRNA.BJAM.scaffold170.1353CONDENSIN COMPLEX SUBUNIT 2
mRNA.BJAM.scaffold1700.8985FOUR-JOINTED BOX PROTEIN 1
mRNA.BJAM.scaffold1700.8986BARDET-BIEDL SYNDROME 1 PROTEIN
mRNA.BJAM.scaffold1700.8987ADP-RIBOSYLATION FACTOR-LIKE PROTEIN 8
mRNA.BJAM.scaffold1700.8988
mRNA.BJAM.scaffold1700.8989
mRNA.BJAM.scaffold1700.8990ANKYRIN REPEAT FAMILY PROTEIN
mRNA.BJAM.scaffold1700.8991SI:DKEY-19B23.12-RELATED
mRNA.BJAM.scaffold1700.8992PLACENTAL PROTEIN 11-RELATED
mRNA.BJAM.scaffold1700.8993DYNEIN INTERMEDIATE CHAIN
mRNA.BJAM.scaffold1700.8994DNA POLYMERASE THETA, PUTATIVE (AFU_ORTHOLOGUE AFUA_1G05260)-RELATED
mRNA.BJAM.scaffold1701.8995
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