About Bathynomus jamesi

Bathynomus jamesi is widely distributed across different environments including the deep-sea and as such are a useful model for studying adaptation, migration, and speciation. They have larger body size than their shallow water relatives and have large stomachs and fat bodies presumably to store organic reserves. To adapt to the benthic environment, they adopt a burrowing behavior . They have developed an oversized stomach, which can take approximately 2/3 of the whole body cavity when it fills up with food. In addition, they are well known for their extremely long fasting state, which should be the longest record to date. Larger animals usually have greater absolute energy requirements.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Bathynomus jamesiArthropoda-Hydrothermal vent898near Hainan Island, in the northern South China Sea (17° 46.845′ N, 110° 38.217′ E)1955234

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM2301448v15.89GbContig2022JAJOZX01Institute of Oceanology, Chinese Academy of SciencesPRJNA77607694.80%23,221

References
TitleJournalPubmed ID
Genome of a giant isopod, Bathynomus jamesi, provides insights into body size evolution and adaptation to deep-sea environmentBMC Biology35562825

Gene Information

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Gene IDDescription
mRNA.BJAM.scaffold2007.10058MITOCHONDRIAL RIBOSOMAL PROTEIN L48
mRNA.BJAM.scaffold2007.10059ATP SYNTHASE SUBUNIT ALPHA, MITOCHONDRIAL
mRNA.BJAM.scaffold2008.10060
mRNA.BJAM.scaffold201.1582UNCHARACTERIZED
mRNA.BJAM.scaffold201.1583
mRNA.BJAM.scaffold2010.10061PROTEIN PHOSPHATASE 1 INHIBITOR POTENTIATED BY PROTEIN KINASE C
mRNA.BJAM.scaffold2011.10062M-AAA PROTEASE-INTERACTING PROTEIN 1, MITOCHONDRIAL
mRNA.BJAM.scaffold2011.10064METHYLMALONYL-COA MUTASE
mRNA.BJAM.scaffold2012.10065
mRNA.BJAM.scaffold2012.10066REGULATOR OF MICROTUBULE DYNAMICS PROTEIN
mRNA.BJAM.scaffold2012.10067MEVALONATE KINASE/GALACTOKINASE
mRNA.BJAM.scaffold2012.10068UNCHARACTERIZED
mRNA.BJAM.scaffold2013.10069UNCHARACTERIZED
mRNA.BJAM.scaffold2015.10070
mRNA.BJAM.scaffold2016.10071TRANSCRIPTION INITIATION FACTOR IA RRN3
mRNA.BJAM.scaffold2016.10072-
mRNA.BJAM.scaffold2016.1007326S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3
mRNA.BJAM.scaffold2016.10074CHITIN BINDING PERITROPHIN-A
mRNA.BJAM.scaffold2016.10075PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
mRNA.BJAM.scaffold2016.10076
mRNA.BJAM.scaffold2016.10077MATRIX METALLOPROTEINASE
mRNA.BJAM.scaffold2016.10078PERIOSTIN-RELATED
mRNA.BJAM.scaffold2017.100792-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
mRNA.BJAM.scaffold2017.10080AQUAPORIN TRANSPORTER
mRNA.BJAM.scaffold2017.10081INTRAFLAGELLAR TRANSPORT PROTEIN 20 HOMOLOG
mRNA.BJAM.scaffold202.1584PROTEIN ARGININE N-METHYLTRANSFERASE
mRNA.BJAM.scaffold202.1585ES-2 PROTEIN - RELATED
mRNA.BJAM.scaffold202.1586
mRNA.BJAM.scaffold202.1587
mRNA.BJAM.scaffold202.1588
mRNA.BJAM.scaffold2020.10082COP9 SIGNALOSOME COMPLEX SUBUNIT 8
mRNA.BJAM.scaffold2021.10084VIRAL IAP-ASSOCIATED FACTOR HOMOLOG
mRNA.BJAM.scaffold2021.10085SERINE/THREONINE-PROTEIN KINASE
mRNA.BJAM.scaffold2021.10086LEUCINE-ZIPPER-LIKE TRANSCRIPTIONAL REGULATOR 1
mRNA.BJAM.scaffold2021.10087UNCHARACTERIZED
mRNA.BJAM.scaffold2021.10088
mRNA.BJAM.scaffold2022.10089SHORT-CHAIN DEHYDROGENASE/REDUCTASE
mRNA.BJAM.scaffold2022.10090
mRNA.BJAM.scaffold2022.10091
mRNA.BJAM.scaffold2023.10092
mRNA.BJAM.scaffold2024.10095VALACYCLOVIR HYDROLASE
mRNA.BJAM.scaffold2024.10096
mRNA.BJAM.scaffold2024.10099ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
mRNA.BJAM.scaffold2024.10100ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
mRNA.BJAM.scaffold2025.10101SOLEUCYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold2025.10102SOLEUCYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold2025.10103SOLEUCYL-TRNA SYNTHETASE
mRNA.BJAM.scaffold2025.10104
mRNA.BJAM.scaffold2026.10105
mRNA.BJAM.scaffold2026.10106GEM-ASSOCIATED PROTEIN 5
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