The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)
Raja radiata Donovan, 1808
Diet Crustaceans, bony fishes and polychaete worms
Greenland and Hudson Bay to South Carolina
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | 96.70 | 62,100/1,500 | 44.5 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032874871.1 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| XP_032874872.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032874873.1 | ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE |
| XP_032874874.1 | ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE |
| XP_032874875.1 | V-TYPE PROTON ATPASE SUBUNIT C |
| XP_032874876.1 | TRANSMEMBRANE PROTEIN 65 |
| XP_032874877.1 | ASAP FAMILY MEMBER |
| XP_032874878.1 | ASAP FAMILY MEMBER |
| XP_032874879.1 | ASAP FAMILY MEMBER |
| XP_032874880.1 | ASAP FAMILY MEMBER |
| XP_032874881.1 | ASAP FAMILY MEMBER |
| XP_032874882.1 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| XP_032874883.1 | UNCHARACTERIZED |
| XP_032874884.1 | UNCHARACTERIZED |
| XP_032874885.1 | UNCHARACTERIZED |
| XP_032874886.1 | UNCHARACTERIZED |
| XP_032874887.1 | UNCHARACTERIZED |
| XP_032874888.1 | UNCHARACTERIZED |
| XP_032874889.1 | UNCHARACTERIZED |
| XP_032874890.1 | UNCHARACTERIZED |
| XP_032874891.1 | PROTEIN FAM84B-RELATED |
| XP_032874892.1 | SPARC OSTEONECTIN |
| XP_032874893.1 | SER/THR PROTEIN KINASE-TRB |
| XP_032874894.1 | UNCHARACTERIZED |
| XP_032874895.1 | UNCHARACTERIZED |
| XP_032874896.1 | UNCHARACTERIZED |
| XP_032874897.1 | WASH COMPLEX SUBUNIT 5 |
| XP_032874898.1 | SQUALENE MONOOXYGENASE |
| XP_032874899.1 | ACTIN BUNDLING/MISSING IN METASTASIS-RELATED |
| XP_032874900.1 | ACTIN BUNDLING/MISSING IN METASTASIS-RELATED |
| XP_032874901.1 | ACTIN BUNDLING/MISSING IN METASTASIS-RELATED |
| XP_032874902.1 | ACTIN BUNDLING/MISSING IN METASTASIS-RELATED |
| XP_032874903.1 | NADH-UBIQUINONE OXIDOREDUCTASE B22 SUBUNIT |
| XP_032874904.1 | SERINE/THREONINE-PROTEIN KINASE RIO1 |
| XP_032874905.1 | SERINE/THREONINE-PROTEIN KINASE RIO1 |
| XP_032874906.1 | ENVOPLAKIN |
| XP_032874907.1 | ENVOPLAKIN |
| XP_032874908.1 | ENVOPLAKIN |
| XP_032874909.1 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| XP_032874910.1 | SI:CH211-266K2.1 |
| XP_032874911.1 | SI:CH211-266K2.1 |
| XP_032874912.1 | COLLAGEN ALPHA |
| XP_032874913.1 | UNCHARACTERIZED |
| XP_032874914.1 | COLLAGEN ALPHA |
| XP_032874915.1 | COLLAGEN ALPHA |
| XP_032874916.1 | TGF-BETA FAMILY |
| XP_032874917.1 | PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED |
| XP_032874918.1 | COMPLEMENT COMPONENT 1, S SUBCOMPONENT-RELATED |
| XP_032874919.1 | PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED |
| XP_032874920.1 | PROTEIN DISULFIDE-ISOMERASE C17H9.14C-RELATED |
