About Amblyraja radiata

The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)

Original Name

Raja radiata Donovan, 1808

Original description

(Donovan et al., 1808)

Partial Description

Diet Crustaceans, bony fishes and polychaete worms

Distribution/locality

Greenland and Hudson Bay to South Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Amblyraja radiataChordatathorny skateHydrothermal vent～1500Tocopilla, northern Chile386614

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
sAmbRad1.1.pri2.6GbChromosome2020JAAGWR01Vertebrate Genomes ProjectPRJNA59136996.70 62,100/1,50044.5-18,474

Gene Information

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Gene IDDescription
XP_032874621.1ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN
XP_032874622.1COILED-COIL DOMAIN-CONTAINING PROTEIN 125
XP_032874623.1COILED-COIL DOMAIN-CONTAINING PROTEIN 125
XP_032874624.1COILED-COIL DOMAIN-CONTAINING PROTEIN 125
XP_032874625.1MENORIN (DENDRITIC BRANCHING PROTEIN)
XP_032874626.1CELL FATE DETERMINING PROTEIN MAB21-RELATED
XP_032874627.1CELL FATE DETERMINING PROTEIN MAB21-RELATED
XP_032874628.1ALPHA-PROTEIN KINASE 1
XP_032874629.1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN
XP_032874630.1DIHYDROFOLATE REDUCTASE
XP_032874631.1DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
XP_032874632.1DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER
XP_032874633.1GUANINE NUCLEOTIDE EXCHANGE FACTOR
XP_032874634.1TRANSPOSASE
XP_032874635.1WD REPEAT-CONTAINING PROTEIN 17
XP_032874636.1ACROSIN-RELATED
XP_032874637.1MYELIN PROTEOLIPID
XP_032874638.1MYELIN PROTEOLIPID
XP_032874639.1SOWAH (DROSOPHILA) HOMOLOG
XP_032874640.1SOWAH (DROSOPHILA) HOMOLOG
XP_032874641.1SOWAH (DROSOPHILA) HOMOLOG
XP_032874642.1AP-1 COMPLEX-ASSOCIATED REGULATORY PROTEIN
XP_032874643.1SOWAH (DROSOPHILA) HOMOLOG
XP_032874644.1SOWAH (DROSOPHILA) HOMOLOG
XP_032874645.1MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT SPC22/23
XP_032874646.1VASCULAR ENDOTHELIAL GROWTH FACTOR
XP_032874647.1FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE
XP_032874648.1FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE
XP_032874649.1L-ASPARAGINASE
XP_032874650.1AP-1 COMPLEX-ASSOCIATED REGULATORY PROTEIN
XP_032874651.1L-ASPARAGINASE
XP_032874652.1L-ASPARAGINASE
XP_032874653.1TENEURIN AND N-ACETYLGLUCOSAMINE-1-PHOSPHODIESTER ALPHA-N-ACETYLGLUCOSAMINIDASE
XP_032874654.1DEOXYCYTIDYLATE DEAMINASE-RELATED
XP_032874655.1KPL2-RELATED
XP_032874656.1AP-1 COMPLEX-ASSOCIATED REGULATORY PROTEIN
XP_032874657.1NUCLEAR PORE COMPLEX PROTEIN NUP155
XP_032874658.1GASTRULATION DEFECTIVE PROTEIN 1-RELATED
XP_032874659.1GASTRULATION DEFECTIVE PROTEIN 1-RELATED
XP_032874660.1SODIUM/DICARBOXYLATE SYMPORTER-RELATED
XP_032874661.1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
XP_032874662.1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
XP_032874663.1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
XP_032874664.1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
XP_032874665.1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
XP_032874666.1AP-1 COMPLEX-ASSOCIATED REGULATORY PROTEIN
XP_032874667.1NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED
XP_032874668.1TRANSMEMBRANE CHANNEL-RELATED
XP_032874669.1TRANSMEMBRANE CHANNEL-RELATED
XP_032874670.1
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