The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)
Raja radiata Donovan, 1808
Diet Crustaceans, bony fishes and polychaete worms
Greenland and Hudson Bay to South Carolina
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | 96.70 | 62,100/1,500 | 44.5 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032874721.1 | TUBULIN-SPECIFIC CHAPERONE A |
| XP_032874722.1 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 12 |
| XP_032874723.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874724.1 | |
| XP_032874725.1 | |
| XP_032874726.1 | AGAP007712-PA |
| XP_032874727.1 | JBTS17 |
| XP_032874728.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874729.1 | CYTOKINE RECEPTOR |
| XP_032874730.1 | JBTS17 |
| XP_032874731.1 | JBTS17 |
| XP_032874732.1 | ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN |
| XP_032874733.1 | ACROSIN-RELATED |
| XP_032874734.1 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| XP_032874735.1 | ACROSIN-RELATED |
| XP_032874736.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874737.1 | ACROSIN-RELATED |
| XP_032874738.1 | MYELIN PROTEOLIPID |
| XP_032874739.1 | |
| XP_032874740.1 | BETA TRANSDUCIN-RELATED PROTEIN |
| XP_032874741.1 | BOMB/KIRA PROTEINS |
| XP_032874742.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| XP_032874743.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874744.1 | DEOXYCYTIDYLATE DEAMINASE-RELATED |
| XP_032874745.1 | B-CELL ANTIGEN RECEPTOR COMPLEX-ASSOCIATED PROTEIN |
| XP_032874746.1 | PROTEASE M1 ZINC METALLOPROTEASE |
| XP_032874747.1 | FATTY ACID ACYL TRANSFERASE-RELATED |
| XP_032874748.1 | FATTY ACID ACYL TRANSFERASE-RELATED |
| XP_032874749.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| XP_032874750.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| XP_032874751.1 | LD33804P |
| XP_032874752.1 | VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED |
| XP_032874753.1 | NEUROPEPTIDES RECEPTOR |
| XP_032874754.1 | NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 |
| XP_032874755.1 | CORTICOLIBERIN/UROCORTIN |
| XP_032874756.1 | UPAR/LY6 DOMAIN-CONTAINING PROTEIN |
| XP_032874757.1 | NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 |
| XP_032874758.1 | OPSIN |
| XP_032874759.1 | ANKYRIN REPEAT FAMILY PROTEIN |
| XP_032874760.1 | HYPOTHETICAL PROTEIN LOC100359752 |
| XP_032874761.1 | OVOCHYMASE-RELATED |
| XP_032874762.1 | SERINE PROTEASE FAMILY S1C HTRA-RELATED |
| XP_032874763.1 | DRAB11-RELATED |
| XP_032874764.1 | |
| XP_032874765.1 | CD226 ANTIGEN |
| XP_032874766.1 | REGULATOR OF G-PROTEIN SIGNALING 22 |
| XP_032874767.1 | RNA (RNA) POLYMERASE II ASSOCIATED PROTEIN HOMOLOG |
| XP_032874768.1 | SERINE PROTEASE FAMILY S1C HTRA-RELATED |
| XP_032874769.1 | FER-1-LIKE |
| XP_032874770.1 | TRANSIENT RECEPTOR POTENTIAL ION CHANNEL PROTEIN |
