About Amblyraja radiata

The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.

Classification

Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)

Original Name

Raja radiata Donovan, 1808

Original Description/Redescription

1. Donovan E. The natural history of British fishes: including scientific and general descriptions of the most interesting species, and an extensive selection of accurately finished coloured plates, taken entirely from original drawings, purposely made from the specimens in a recent state, and for the most part whilst living[M]. and for F. and C. Rivington, 1808. (Donovan et al., 1808)

Partial Description

Diet Crustaceans, bony fishes and polychaete worms

Distribution/Locality

Greenland and Hudson Bay to South Carolina


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Amblyraja radiataChordatathorny skateHydrothermal vent~1500Tocopilla, northern Chile386614

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
sAmbRad1.1.pri2.6GbChromosome2020JAAGWR01Vertebrate Genomes ProjectPRJNA59136996.70 62,100/1,50044.5-18,474

Gene Information

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Gene IDDescription
XP_032874471.1
XP_032874472.1CENTROMERE PROTEIN H
XP_032874473.1CELL DIVISION PROTEIN KINASE
XP_032874474.128S RIBOSOMAL PROTEIN S36, MITOCHONDRIAL
XP_032874475.1SERINE INCORPORATOR
XP_032874476.1SERINE INCORPORATOR
XP_032874477.1CYSTEINE PROTEASE FAMILY C1-RELATED
XP_032874478.1THROMBOSPONDIN
XP_032874479.1METAXIN RELATED
XP_032874480.1E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED
XP_032874481.1POLY A POLYMERASE CID PAP -RELATED
XP_032874482.1POLY A POLYMERASE CID PAP -RELATED
XP_032874483.1POLY A POLYMERASE CID PAP -RELATED
XP_032874484.1POLY A POLYMERASE CID PAP -RELATED
XP_032874485.1POLY A POLYMERASE CID PAP -RELATED
XP_032874486.1HOMER
XP_032874487.1P300 TRANSCRIPTIONAL COFACTOR JMY-RELATED
XP_032874488.1P300 TRANSCRIPTIONAL COFACTOR JMY-RELATED
XP_032874489.1AMINOMETHYLTRANSFERASE
XP_032874490.1BETAINE--HOMOCYSTEINE S-METHYLTRANSFERASE 1
XP_032874491.1ARYLSULFATASE
XP_032874492.1SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP
XP_032874493.1LIPOMA HMGIC FUSION PARTNER-LIKE PROTEIN
XP_032874494.1ADAPTOR COMPLEX SUBUNIT BETA FAMILY MEMBER
XP_032874495.1HOMEOBOX PROTEIN ORTHOPEDIA
XP_032874496.1WDR41-RELATED
XP_032874497.1WDR41-RELATED
XP_032874498.1WDR41-RELATED
XP_032874499.1TRYPTOPHAN 2,3-DIOXYGENASE
XP_032874500.1WDR41-RELATED
XP_032874501.1WDR41-RELATED
XP_032874502.1CYCLIC NUCLEOTIDE PHOSPHODIESTERASE
XP_032874503.1BLOM7
XP_032874504.1BLOM7
XP_032874505.1ANGIOGENIC FACTOR WITH G PATCH AND FHA DOMAINS 1
XP_032874506.1CORTICOTROPIN-RELEASING FACTOR-BINDING PROTEIN
XP_032874507.1STEROL DESATURASE
XP_032874508.1G-PROTEIN COUPLED RECEPTOR
XP_032874509.1G-PROTEIN COUPLED RECEPTOR
XP_032874510.1GUANYLATE CYCLASE SOLUBLE SUBUNIT BETA-2
XP_032874511.1G-PROTEIN COUPLED RECEPTOR
XP_032874512.1RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
XP_032874513.1RAS GTPASE-ACTIVATING PROTEIN WITH IQ MOTIF
XP_032874514.1SYNAPTIC VESICLE GLYCOPROTEIN 2
XP_032874515.1SYNAPTIC VESICLE GLYCOPROTEIN 2
XP_032874516.1SYNAPTIC VESICLE GLYCOPROTEIN 2
XP_032874517.1CENTROSOMAL PROTEIN POC5
XP_032874518.1CENTROSOMAL PROTEIN POC5
XP_032874519.1CENTROSOMAL PROTEIN POC5
XP_032874520.1CENTROSOMAL PROTEIN POC5
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