The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)
Raja radiata Donovan, 1808
Diet Crustaceans, bony fishes and polychaete worms
Greenland and Hudson Bay to South Carolina
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | 96.70 | 62,100/1,500 | 44.5 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032874571.1 | TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER |
| XP_032874572.1 | TRANSCRIPTION FACTOR BTF3 FAMILY MEMBER |
| XP_032874573.1 | FORKHEAD BOX PROTEIN |
| XP_032874574.1 | LUPUS LA PROTEIN-RELATED |
| XP_032874575.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| XP_032874576.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| XP_032874577.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| XP_032874578.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| XP_032874579.1 | PROLINE-SERINE-THREONINE PHOSPHATASE INTERACTING PROTEIN 1 |
| XP_032874580.1 | IMPORTIN BETA |
| XP_032874581.1 | IMPORTIN BETA |
| XP_032874582.1 | IMPORTIN BETA |
| XP_032874583.1 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
| XP_032874584.1 | LUPUS LA PROTEIN-RELATED |
| XP_032874585.1 | NADP-SPECIFIC ISOCITRATE DEHYDROGENASE |
| XP_032874586.1 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S27 |
| XP_032874587.1 | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, MITOCHONDRIAL |
| XP_032874588.1 | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, MITOCHONDRIAL |
| XP_032874589.1 | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, MITOCHONDRIAL |
| XP_032874590.1 | PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 2, MITOCHONDRIAL |
| XP_032874591.1 | MICROTUBULE-ASSOCIATED PROTEIN |
| XP_032874592.1 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| XP_032874593.1 | COCAINE AND AMPHETAMINE REGULATED TRANSCRIPT PROTEIN |
| XP_032874594.1 | ACETYL, PROPIONYL, PYRUVATE, AND GLUTACONYL CARBOXYLASE-RELATED |
| XP_032874595.1 | RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B |
| XP_032874596.1 | RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B |
| XP_032874597.1 | BASIC HELIX-LOOP-HELIX PROTEIN NEUROGENIN-RELATED |
| XP_032874598.1 | SURVIVAL MOTOR NEURON-LIKE PROTEIN 1 |
| XP_032874599.1 | SURVIVAL MOTOR NEURON-LIKE PROTEIN 1 |
| XP_032874600.1 | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 |
| XP_032874601.1 | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 |
| XP_032874602.1 | GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 |
| XP_032874603.1 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| XP_032874604.1 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| XP_032874605.1 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| XP_032874606.1 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| XP_032874607.1 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| XP_032874608.1 | OCCLUDIN AND RNA POLYMERASE II ELONGATION FACTOR ELL |
| XP_032874609.1 | CELL CYCLE CHECKPOINT PROTEIN RAD17 |
| XP_032874610.1 | CELL CYCLE CHECKPOINT PROTEIN RAD17 |
| XP_032874611.1 | CELL CYCLE CHECKPOINT PROTEIN RAD17 |
| XP_032874612.1 | POS9-ACTIVATING FACTOR FAP7-RELATED |
| XP_032874613.1 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN |
| XP_032874614.1 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN |
| XP_032874615.1 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN |
| XP_032874616.1 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN |
| XP_032874617.1 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN |
| XP_032874618.1 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN |
| XP_032874619.1 | ZINC FINGER FYVE DOMAIN-CONTAINING PROTEIN |
| XP_032874620.1 | ALPHA-PROTEIN KINASE 1 |
