The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)
Raja radiata Donovan, 1808
Diet Crustaceans, bony fishes and polychaete worms
Greenland and Hudson Bay to South Carolina
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | 96.70 | 62,100/1,500 | 44.5 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032874671.1 | RH59310P |
| XP_032874672.1 | |
| XP_032874673.1 | |
| XP_032874674.1 | MAJOR INTRINSICALLY DISORDERED NOTCH2-BINDING RECEPTOR 1 MINAR1 FAMILY MEMBER |
| XP_032874675.1 | CORTEXIN-1-RELATED |
| XP_032874676.1 | FORKHEAD BOX PROTEIN |
| XP_032874677.1 | DOUBLESEX AND MAB-3 RELATED TRANSCRIPTION FACTOR DMRT |
| XP_032874678.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| XP_032874679.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| XP_032874680.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| XP_032874681.1 | VOLTAGE-GATED POTASSIUM CHANNEL |
| XP_032874682.1 | SMALL INDUCIBLE CYTOKINE A |
| XP_032874683.1 | UNCHARACTERIZED |
| XP_032874684.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874685.1 | TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE |
| XP_032874686.1 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED PROTEIN 2-RELATED |
| XP_032874687.1 | PORCUPINE |
| XP_032874688.1 | TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN |
| XP_032874689.1 | ACONITASE/IRON-RESPONSIVE ELEMENT FAMILY MEMBER |
| XP_032874690.1 | TRANSMEMBRANE PROTEIN 215 |
| XP_032874691.1 | GUANYLYL CYCLASE |
| XP_032874692.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874693.1 | COMPLEMENT COMPONENT-RELATED SUSHI DOMAIN-CONTAINING |
| XP_032874694.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032874695.1 | NEUROTRANSMITTER GATED ION CHANNEL |
| XP_032874696.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874697.1 | NIPPED-B-LIKE PROTEIN DELANGIN SCC2-RELATED |
| XP_032874698.1 | |
| XP_032874699.1 | PROFILIN |
| XP_032874700.1 | SIALIC ACID-BINDING IG-LIKE LECTIN 15 |
| XP_032874701.1 | SIALIC ACID-BINDING IG-LIKE LECTIN 15 |
| XP_032874702.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874703.1 | SIALIC ACID-BINDING IG-LIKE LECTIN 15 |
| XP_032874704.1 | SIALIC ACID-BINDING IG-LIKE LECTIN 15 |
| XP_032874705.1 | 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER |
| XP_032874706.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032874707.1 | G_PROTEIN_RECEP_F1_2 DOMAIN-CONTAINING PROTEIN |
| XP_032874708.1 | SIALIC ACID-BINDING IG-LIKE LECTIN 15 |
| XP_032874709.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874710.1 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
| XP_032874711.1 | SOLUTE CARRIER FAMILY 43 MEMBER 3-RELATED |
| XP_032874712.1 | EF-HAND CALCIUM-BINDING DOMAIN-CONTAINING PROTEIN 6-RELATED |
| XP_032874713.1 | SORTING NEXIN |
| XP_032874714.1 | |
| XP_032874715.1 | SERINE/ARGININE-RICH SPLICING FACTOR |
| XP_032874716.1 | PITUITARY HOMEOBOX HOMOLOG PTX1 |
| XP_032874717.1 | INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA |
| XP_032874718.1 | SERINE/THREONINE-PROTEIN KINASE |
| XP_032874719.1 | CYCLINS |
| XP_032874720.1 |
