The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)
Raja radiata Donovan, 1808
Diet Crustaceans, bony fishes and polychaete worms
Greenland and Hudson Bay to South Carolina
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | 96.70 | 62,100/1,500 | 44.5 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032875021.1 | NEUROHYPOPHYSIAL HORMONES, N-TERMINAL DOMAIN CONTAINING PROTEIN |
| XP_032875022.1 | NEUROHYPOPHYSIAL HORMONES, N-TERMINAL DOMAIN CONTAINING PROTEIN |
| XP_032875023.1 | TRANSMEMBRANE PROTEIN 74 |
| XP_032875024.1 | CHRONIC MYELOGENOUS LEUKEMIA TUMOR ANTIGEN 66 |
| XP_032875025.1 | ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR |
| XP_032875026.1 | ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR |
| XP_032875027.1 | TRANSMEMBRANE PROTEIN 192 |
| XP_032875028.1 | ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR |
| XP_032875029.1 | ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR |
| XP_032875030.1 | SEPTIN |
| XP_032875031.1 | SEPTIN |
| XP_032875032.1 | SEPTIN |
| XP_032875033.1 | HOMOCYSTEINE-RESPONSIVE ENDOPLASMIC RETICULUM-RESIDENT UNIQUITIN-LIKE DOMAIN HERPUD PROTEIN FAMILY MEMBER |
| XP_032875034.1 | TRANSMEMBRANE PROTEIN 192 |
| XP_032875035.1 | T-BOX PROTEIN-RELATED |
| XP_032875036.1 | T-BOX PROTEIN-RELATED |
| XP_032875037.1 | CROSSVEINLESS 2 |
| XP_032875038.1 | DPY-19-LIKE 1, LIKE (H. SAPIENS) |
| XP_032875039.1 | PARATHYROID HORMONE-RESPONSIVE B1 GENE |
| XP_032875040.1 | PARATHYROID HORMONE-RESPONSIVE B1 GENE |
| XP_032875041.1 | PARATHYROID HORMONE-RESPONSIVE B1 GENE |
| XP_032875042.1 | PARATHYROID HORMONE-RESPONSIVE B1 GENE |
| XP_032875043.1 | PARATHYROID HORMONE-RESPONSIVE B1 GENE |
| XP_032875044.1 | TRANSMEMBRANE PROTEIN 192 |
| XP_032875045.1 | 5'-NUCLEOTIDASE |
| XP_032875046.1 | 5'-NUCLEOTIDASE |
| XP_032875047.1 | 5'-NUCLEOTIDASE |
| XP_032875048.1 | SUSHI DOMAIN-CONTAINING PROTEIN 5 |
| XP_032875049.1 | PEPTIDYLPROLYL ISOMERASE |
| XP_032875050.1 | PROTEIN LYSINE HYDROXYLATION COMPLEX COMPONENT |
| XP_032875051.1 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
| XP_032875052.1 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
| XP_032875053.1 | |
| XP_032875054.1 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
| XP_032875055.1 | STEROIDOGENIC ACUTE REGULATORY PROTEIN-LIKE |
| XP_032875056.1 | MAMMALIAN EPENDYMIN-RELATED PROTEIN 1 |
| XP_032875057.1 | LATE SECRETORY PATHWAY PROTEIN AVL9-RELATED |
| XP_032875058.1 | KELCH PROTEIN |
| XP_032875059.1 | UNCHARACTERIZED DUF1308 |
| XP_032875060.1 | UNCHARACTERIZED DUF1308 |
| XP_032875061.1 | UNCHARACTERIZED DUF1308 |
| XP_032875062.1 | SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT |
| XP_032875063.1 | SUCCINATE DEHYDROGENASE 2 FLAVOPROTEIN SUBUNIT |
| XP_032875064.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 127 |
| XP_032875065.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 127 |
| XP_032875066.1 | COILED-COIL DOMAIN-CONTAINING PROTEIN 127 |
| XP_032875067.1 | COLLAGEN ALPHA |
| XP_032875068.1 | COLLAGEN ALPHA |
| XP_032875069.1 | COLLAGEN ALPHA |
| XP_032875070.1 | COLLAGEN ALPHA |
