The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)
Raja radiata Donovan, 1808
Diet Crustaceans, bony fishes and polychaete worms
Greenland and Hudson Bay to South Carolina
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | 96.70 | 62,100/1,500 | 44.5 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032875121.1 | PAPILLOMAVIRUS REGULATORY FACTOR PRF-1 |
| XP_032875122.1 | |
| XP_032875123.1 | |
| XP_032875124.1 | |
| XP_032875125.1 | |
| XP_032875126.1 | AGAP004733-PA |
| XP_032875127.1 | TUMOR PROTEIN D52 |
| XP_032875128.1 | TUMOR PROTEIN D52 |
| XP_032875129.1 | TUMOR PROTEIN D52 |
| XP_032875130.1 | TUMOR PROTEIN D52 |
| XP_032875131.1 | TUMOR PROTEIN D52 |
| XP_032875132.1 | TUMOR PROTEIN D52 |
| XP_032875133.1 | TUMOR PROTEIN D52 |
| XP_032875134.1 | TUMOR PROTEIN D52 |
| XP_032875135.1 | TUMOR PROTEIN D52 |
| XP_032875136.1 | TUMOR PROTEIN D52 |
| XP_032875137.1 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S28 |
| XP_032875138.1 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, HES-RELATED |
| XP_032875139.1 | STATHMIN |
| XP_032875140.1 | C2H2 ZINC FINGER CGI-62-RELATED |
| XP_032875141.1 | CAMP-DEPENDENT PROTEIN KINASE INHIBITOR/PKI |
| XP_032875142.1 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
| XP_032875143.1 | CAMP-DEPENDENT PROTEIN KINASE INHIBITOR/PKI |
| XP_032875144.1 | SERINE INCORPORATOR |
| XP_032875145.1 | PEROXISOME BIOGENESIS FACTOR 2 |
| XP_032875146.1 | PEROXISOME BIOGENESIS FACTOR 2 |
| XP_032875147.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875148.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875149.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875150.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875151.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875152.1 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
| XP_032875153.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875154.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875155.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875156.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875157.1 | ZINC FINGER HOMEOBOX PROTEIN |
| XP_032875158.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032875159.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032875160.1 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
| XP_032875161.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032875162.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032875163.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032875164.1 | NUCLEAR HORMONE RECEPTOR |
| XP_032875165.1 | LCCL DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G08630) |
| XP_032875166.1 | LCCL DOMAIN PROTEIN (AFU_ORTHOLOGUE AFUA_5G08630) |
| XP_032875167.1 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
| XP_032875168.1 | ACTIN FILAMENT-ASSOCIATED PROTEIN 1 FAMILY MEMBER |
| XP_032875169.1 | GDAP1, ISOFORM A |
| XP_032875170.1 | GDAP1, ISOFORM A |
