The thorny skate Amblyraja radiata is a species of fish in the family Rajidae. This bottom-living skate lives in the North and south-eastern Atlantic Ocean in depths ranging from 20 to 1,000 m and water temperatures from −1 to 14 °C. It has a hard, roughly triangular snout and a tail, which is shorter than its body. It eats crustaceans, small fishes, and worms. It produces egg capsules, which hatch outside the body.
Animalia (Kingdom); Chordata (Phylum); Vertebrata (Subphylum); Gnathostomata (Infraphylum); Chondrichthyes (Parvphylum); Elasmobranchii (Class); Neoselachii (Subclass); Batoidea (Infraclass); Rajiformes (Order); Rajidae (Family); Amblyraja (Genus); Amblyraja radiata (Species)
Raja radiata Donovan, 1808
Diet Crustaceans, bony fishes and polychaete worms
Greenland and Hudson Bay to South Carolina
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Amblyraja radiata | Chordata | thorny skate | Hydrothermal vent | ～1500 | Tocopilla, northern Chile | 386614 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness (%) | Scaffold/Contig N50 (kb) | GC content (%) | Repeat Rate (%) | Gene Number |
|---|---|---|---|---|---|---|---|---|---|---|---|
| sAmbRad1.1.pri | 2.6Gb | Chromosome | 2020 | JAAGWR01 | Vertebrate Genomes Project | PRJNA591369 | 96.70 | 62,100/1,500 | 44.5 | - | 18,474 |
| Gene ID | Description |
|---|---|
| XP_032875071.1 | COLLAGEN ALPHA |
| XP_032875072.1 | COLLAGEN ALPHA |
| XP_032875073.1 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| XP_032875074.1 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| XP_032875075.1 | TRANSFORMING GROWTH FACTOR-BETA RECEPTOR TYPE I AND II |
| XP_032875076.1 | SERINE PROTEASE INHIBITOR |
| XP_032875077.1 | SERINE PROTEASE INHIBITOR |
| XP_032875078.1 | DEP DOMAIN PROTEIN |
| XP_032875079.1 | DEP DOMAIN PROTEIN |
| XP_032875080.1 | GRPE PROTEIN |
| XP_032875081.1 | SISTER CHROMATID COHESION PROTEIN DCC1-RELATED |
| XP_032875082.1 | SISTER CHROMATID COHESION PROTEIN DCC1-RELATED |
| XP_032875083.1 | TRANSCRIPTION INITIATION FACTOR TFIID |
| XP_032875084.1 | TRANSCRIPTION INITIATION FACTOR TFIID |
| XP_032875085.1 | TRANSCRIPTION INITIATION FACTOR TFIID |
| XP_032875086.1 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| XP_032875087.1 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| XP_032875088.1 | ECTONUCLEOTIDE PYROPHOSPHATASE/PHOSPHODIESTERASE |
| XP_032875089.1 | CONNECTIVE TISSUE GROWTH FACTOR-RELATED |
| XP_032875090.1 | MARVEL-CONTAINING POTENTIAL LIPID RAFT-ASSOCIATED PROTEIN |
| XP_032875091.1 | TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED |
| XP_032875092.1 | LITHOSTATHINE |
| XP_032875093.1 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER |
| XP_032875094.1 | TUMOR NECROSIS FACTOR RECEPTOR SUPERFAMILY MEMBER |
| XP_032875095.1 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10 |
| XP_032875096.1 | STERILE ALPHA MOTIF DOMAIN CONTAINING PROTEIN 10 |
| XP_032875097.1 | ACETYLGLUCOSAMINYLTRANSFERASE |
| XP_032875098.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30 |
| XP_032875099.1 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30 |
| XP_032875100.1 | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER |
| XP_032875101.1 | PROTEIN FAM167A |
| XP_032875102.1 | SORTILIN RELATED |
| XP_032875103.1 | BEN DOMAIN-CONTAINING PROTEIN 5 |
| XP_032875104.1 | SCC1 / RAD21 FAMILY MEMBER |
| XP_032875105.1 | UNCHARACTERIZED |
| XP_032875106.1 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED |
| XP_032875107.1 | ZINC FINGER TRANSCRIPTION FACTOR TRPS1 |
| XP_032875108.1 | ZINC FINGER TRANSCRIPTION FACTOR TRPS1 |
| XP_032875109.1 | ZINC FINGER TRANSCRIPTION FACTOR TRPS1 |
| XP_032875110.1 | ZINC FINGER TRANSCRIPTION FACTOR TRPS1 |
| XP_032875111.1 | ZINC FINGER TRANSCRIPTION FACTOR TRPS1 |
| XP_032875112.1 | ZINC FINGER TRANSCRIPTION FACTOR TRPS1 |
| XP_032875113.1 | SORTILIN RELATED |
| XP_032875114.1 | VOLTAGE-GATED POTASSIUM CHANNEL |
| XP_032875115.1 | ZINC FINGER PROTEIN |
| XP_032875116.1 | 39S RIBOSOMAL PROTEIN L53, MITOCHONDRIAL |
| XP_032875117.1 | PHOSPHOPROTEIN ASSOCIATED WITH GLYCOSPHINGOLIPID-ENRICHED MICRODOMAINS 1 |
| XP_032875118.1 | PHOSPHOPROTEIN ASSOCIATED WITH GLYCOSPHINGOLIPID-ENRICHED MICRODOMAINS 1 |
| XP_032875119.1 | PHOSPHOPROTEIN ASSOCIATED WITH GLYCOSPHINGOLIPID-ENRICHED MICRODOMAINS 1 |
| XP_032875120.1 | PHOSPHOPROTEIN ASSOCIATED WITH GLYCOSPHINGOLIPID-ENRICHED MICRODOMAINS 1 |
