About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m，which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS06751GROWTH ARREST AND DNA DAMAGE-INDUCIBLE PROTEIN GADD45
HS06752AGAP001464-PB
HS06753MAP/MICROTUBULE AFFINITY-REGULATING KINASE
HS06754ZINC FINGER PROTEIN
HS06755EPM2A-INTERACTING PROTEIN 1
HS06756SELENOPROTEIN P
HS06757SPOT2-RELATED
HS06758CYTOKINE RECEPTOR
HS06759F-BOX ONLY PROTEIN 4
HS06760UPF0600 PROTEIN C5ORF51
HS06761KETOACID-COENZYME A TRANSFERASE
HS06762UNCHARACTERIZED
HS06763COMPLEMENT COMPONENT C6
HS06764R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG
HS06765E3 UBIQUITIN-PROTEIN LIGASE RNF180
HS06766ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR
HS06767IMPORTIN-7, 8, 11
HS06768
HS06769RH59310P
HS06770SNF2/RAD54 FAMILY MEMBER
HS06771PROTEIN PATCHED
HS06772FANCONI ANEMIA GROUP C PROTEIN FANCC
HS06773AMINOPEPTIDASE O
HS06774DEDICATOR OF CYTOKINESIS DOCK
HS06775COBW-RELATED
HS06776FORKHEAD BOX PROTEIN
HS06777PHOSPHOHEXOMUTASE FAMILY MEMBER
HS06778
HS06779ZINC FINGER SWIM DOMAIN CONTAINING PROTEIN 4, 5, 6
HS06780SMALL INTEGRAL MEMBRANE PROTEIN 15
HS06781ADH DEHYDROGENASE [UBIQUINONE] 1 ALPHA SUBCOMPLEX ASSEMBLY FACTOR 2
HS06782DNA EXCISION REPAIR PROTEIN ERCC-8
HS06783FATTY ACID ACYL TRANSFERASE-RELATED
HS06784SI:CH211-196P9.1-RELATED
HS06785NACHT, LRR AND CARD DOMAINS-CONTAINING
HS06786EXPRESSED PROTEIN
HS06787
HS06788LIM DOMAIN KINASE 1
HS06789NACHT, LRR AND CARD DOMAINS-CONTAINING
HS06790
HS06791LIM DOMAIN KINASE 1
HS06792ZINC PHOSPHODIESTERASE ELAC PROTEIN 1
HS06793ZINC PHOSPHODIESTERASE ELAC PROTEIN 1
HS06794NACHT, LRR AND CARD DOMAINS-CONTAINING
HS06795ZINC PHOSPHODIESTERASE ELAC PROTEIN 1
HS06796NACHT, LRR AND CARD DOMAINS-CONTAINING
HS06797NACHT, LRR AND CARD DOMAINS-CONTAINING
HS06798NACHT, LRR AND PYD DOMAINS-CONTAINING PROTEIN 12
HS06799NACHT, LRR AND CARD DOMAINS-CONTAINING
HS06800NACHT, LRR AND CARD DOMAINS-CONTAINING
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