About Gigantidas platifrons

Gigantidas platifrons is a deep-sea mussel that is common in hydrothermal vents and methane seeps in the Western Pacific Ocean. It is found in hydrothermal vents in the Okinawa Trough and cold seeps in Sagami Bay (Japan) and the South China Sea. Morever, it harbours methane-oxidizing bacteria in its gill, which help to transfer methane into material and energy to help it to thrive in such environments.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Gigantidas platifronsMolluscacold seep mussel, Bathymodiolus platifronsCold seep/Hydrothermal vent1,122-1,430methane seep (22° 06.921′ N, 119° 17.131′ E) in the South China Sea2830794

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Bpl_v1.01.64GbScaffold2017MJUT01Hong Kong University of Science and TechnologyPRJNA32854296.30%33,584

References
TitleJournalPubmed ID
Adaptation to deep-sea chemosynthetic environments as revealed by mussel genomesNature Ecology & Evolution28812709

Gene Information

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Gene IDDescription
Bpl_scaf_11099-0.22LIPOXYGENASE
Bpl_scaf_11100-0.4MUCIN 4-RELATED
Bpl_scaf_11102-0.5
Bpl_scaf_11102-1.11DYNEIN HEAVY CHAIN
Bpl_scaf_11102-1.12RP42 RELATED
Bpl_scaf_11102-2.10
Bpl_scaf_11102-2.32TUBULIN
Bpl_scaf_11102-2.4
Bpl_scaf_11102-3.5PULMONARY SURFACTANT-ASSOCIATED PROTEIN A
Bpl_scaf_11102-3.6
Bpl_scaf_11102-3.8
Bpl_scaf_11102-4.4ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_11102-4.5
Bpl_scaf_11102-5.6LIM/HOMEOBOX PROTEIN LHX
Bpl_scaf_11102-5.8LIM/HOMEOBOX PROTEIN LHX
Bpl_scaf_11102-6.8DYNACTIN 1-RELATED MICROTUBULE-BINDING
Bpl_scaf_11102-6.9ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_11105-0.1MANNOSE, PHOSPHOLIPASE, LECTIN RECEPTOR RELATED
Bpl_scaf_11105-0.4C-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 180
Bpl_scaf_11106-0.0ALPHA KINASE/ELONGATION FACTOR 2 KINASE
Bpl_scaf_11108-0.5VITELLOGENIN RECEPTOR-LIKE PROTEIN-RELATED-RELATED
Bpl_scaf_11110-0.2FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Bpl_scaf_11113-0.6N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE
Bpl_scaf_11115-0.4XANTHINE DEHYDROGENASE
Bpl_scaf_11117-0.0
Bpl_scaf_11118-0.4OS05G0424000 PROTEIN-RELATED
Bpl_scaf_11119-0.3
Bpl_scaf_1112-0.13ARYLSULFATASE
Bpl_scaf_11124-0.6
Bpl_scaf_11124-0.7SOLUTE CARRIER FAMILY 22 MEMBER
Bpl_scaf_11128-0.2EXPERIMENTAL AUTOIMMUNE PROSTATITIS ANTIGEN 2-RELATED
Bpl_scaf_11129-0.22
Bpl_scaf_11129-0.26
Bpl_scaf_11129-1.0PUTATIVE-RELATED
Bpl_scaf_11129-1.17
Bpl_scaf_11129-1.18
Bpl_scaf_11129-2.12
Bpl_scaf_11129-2.19
Bpl_scaf_11129-2.20
Bpl_scaf_11129-2.21
Bpl_scaf_11129-2.24
Bpl_scaf_11129-3.23
Bpl_scaf_11129-3.34
Bpl_scaf_11129-3.35
Bpl_scaf_11129-3.36
Bpl_scaf_11129-3.37
Bpl_scaf_11129-3.38
Bpl_scaf_11129-3.39
Bpl_scaf_11129-3.40
Bpl_scaf_11129-3.41
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