About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.

Classification

Animalia (Kingdom); Cnidaria (Phylum); Anthozoa (Subphylum); Hexacorallia (Class); Scleractinia (Order); Vacatina (Suborder); Caryophylliidae (Family); Lophelia (Genus); Lophelia pertusa (Species)

Original Name

Madrepora pertusa Linnaeus, 1758

Key Reference Paper

1. Linnaeus C. Systema Naturae per regna tria naturae, secundum classes, ordines, genera, species; cum characteribus, differentiis, synonymis, locis[M]. apud JB Delamolliere, 1789. (Linnaeus et al., 1789)

Distribution

Nova Scotia south to New Jersey. Depth range 39-2775 m


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90 1,600/438.639.457.3737,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 107 108 109 110 111 112 113 114 115 116 Forward> Last>>        1875 pages in total

Gene IDDescription
OS493_002403-T1ATP-DEPENDENT RNA HELICASE RHLE-RELATED
OS493_002404-T1G KINASE ANCHORING PROTEIN 1
OS493_002405-T1RIBOSOMAL PROTEIN S19P FAMILY MEMBER
OS493_002406-T1-
OS493_002407-T1UTP15 U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 15 FAMILY MEMBER
OS493_002408-T1PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
OS493_002409-T1PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
OS493_002410-T1PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
OS493_002411-T1PAIRED BOX PROTEIN PAX-6-RELATED-RELATED
OS493_002412-T1FORKHEAD BOX PROTEIN
OS493_002413-T1BTK-BINDING PROTEIN-RELATED
OS493_002414-T1REGULATOR OF CHROMOSOME CONDENSATION
OS493_002415-T1E3 UBIQUITIN-PROTEIN LIGASE HECTD3
OS493_002416-T1SORTING NEXIN 17 AND 27
OS493_002417-T1SERINE-THREONINE PROTEIN KINASE
OS493_002418-T1-
OS493_002419-T1UNCHARACTERIZED
OS493_002420-T1SMALL NUCLEAR RIBONUCLEOPROTEIN SM
OS493_002421-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
OS493_002422-T1MULTI-COPPER OXIDASE
TOP