About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides02092AMINO ACID TRANSPORTER
Paelopatides02093AMINO ACID TRANSPORTER
Paelopatides02094-
Paelopatides02095-
Paelopatides02096CYTOPLASMIC TRNA 2-THIOLATION PROTEIN 2
Paelopatides02097YALI0E18722P
Paelopatides02098B2 BRADYKININ RECEPTOR/ANGIOTENSIN II RECEPTOR
Paelopatides02099-
Paelopatides02100CYSTEINE-RICH, ACIDIC INTEGRAL MEMBRANE PROTEIN-RELATED
Paelopatides02101PROTEIN CBG26694
Paelopatides02102DED DOMAIN-CONTAINING PROTEIN
Paelopatides02103B-CELL RECEPTOR CD22
Paelopatides02104LETHAL 2 GIANT LARVAE PROTEIN
Paelopatides02105HEAT SHOCK PROTEIN 70KDA
Paelopatides02106SI:CH211-196P9.1-RELATED
Paelopatides02107-
Paelopatides02108PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Paelopatides02109PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides02110RAD25/XP-B DNA REPAIR HELICASE
Paelopatides02111OXIDOREDUCTASES
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