About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01965EG:EG0003.4 PROTEIN-RELATED
Paelopatides01966REVERSE TRANSCRIPTASES
Paelopatides01971ZINC FINGER-CONTAINING PROTEIN P48ZNF
Paelopatides01972-
Paelopatides01973-
Paelopatides01974PLAKOPHILLIN-RELATED
Paelopatides01975-
Paelopatides01976-
Paelopatides01977CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR FAMILY MEMBER
Paelopatides01978-
Paelopatides01979MYOTROPHIN
Paelopatides01980TRANSPOSASE, PUTATIVE-RELATED
Paelopatides01981GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides01982GTPASE, IMAP FAMILY MEMBER-RELATED
Paelopatides01983TUMOR NECROSIS FACTOR FAMILY MEMBER
Paelopatides01985DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE 48 KDA SUBUNIT
Paelopatides01986FIBRINOGEN/TENASCIN/ANGIOPOEITIN
Paelopatides01987-
Paelopatides01988-
Paelopatides01989REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
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