About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01902REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01903CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01904PROTEIN CBG26694
Paelopatides01905-
Paelopatides01906-
Paelopatides01907CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01908CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01909-
Paelopatides01910CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01911-
Paelopatides01912-
Paelopatides01913NEUROBLASTOMA-AMPLIFIED SEQUENCE
Paelopatides01914-
Paelopatides01915-
Paelopatides01916-
Paelopatides01917ANTIGEN BSP, PUTATIVE-RELATED
Paelopatides01918-
Paelopatides01919-
Paelopatides01920-
Paelopatides01921ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
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