About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01945-
Paelopatides01946METALLOPROTEASE TIKI
Paelopatides01947-
Paelopatides01948-
Paelopatides01949ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01950ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01951FAS-ASSOCIATING DEATH DOMAIN-CONTAINING PROTEIN FADD
Paelopatides01952-
Paelopatides01953-
Paelopatides01954ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides01955-
Paelopatides01956STG PROTEIN
Paelopatides01957-
Paelopatides01958PHAGE_INTEGRASE DOMAIN-CONTAINING PROTEIN
Paelopatides01959CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01960CXC DOMAIN-CONTAINING PROTEIN-RELATED
Paelopatides01961ENDONUCLEASE
Paelopatides0196260S RIBOSOMAL PROTEIN L26 FAMILY MEMBER
Paelopatides01963EPM2A-INTERACTING PROTEIN 1
Paelopatides01964UBIQUITIN-PROTEIN LIGASE E3C
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