About Paelopatides sp. Yap

The hadal sea cucumber Paelopatides sp. Yap is a species of hadal sea cucumber in the family Stichopodidae, collected from the Yap Trench in the western Pacific Ocean. This species is adapted to the extreme conditions of the hadal zone, thriving at great depths where pressures are immense and temperatures are near freezing. Its discovery contributes to our understanding of biodiversity and ecological dynamics in one of the least explored regions of the deep sea.

Classification

Animalia Kingdom; Echinodermata (Phylum); Holothuroidea (Class); Stichopodidae (Family); Paelopatides (Genus); Paelopatides sp. Yap (Species)


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Paelopatides sp. YapEchinodermataPaelopatides sp. YapDeep sea6,633Yap Trench at 8°1′22"N; 137°50′41"E-

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completeness (%)Scaffold/Contig N50 (kb)GC content (%)Repeat Rate (%)Gene Number
-3.7GbContig2020-Fujian Agriculture and Forestry UniversityPRJCA00378989.40 137.138.1976.0657,522

References
TitleJournalPubmed ID
The genome of a hadal sea cucumber reveals novel adaptive strategies to deep-sea environmentsiScience36444293

Gene Information

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Gene IDDescription
Paelopatides01923PROTEIN CBG26694
Paelopatides01924-
Paelopatides01925ULP_PROTEASE DOMAIN-CONTAINING PROTEIN
Paelopatides01926-
Paelopatides01927-
Paelopatides01928COUNTIN RECEPTOR CNR3-RELATED
Paelopatides01929-
Paelopatides01930REVERSE TRANSCRIPTASES
Paelopatides01931REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN
Paelopatides01932COUNTIN RECEPTOR CNR3-RELATED
Paelopatides01933-
Paelopatides01934UNCHARACTERIZED
Paelopatides01937HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATED
Paelopatides01938-
Paelopatides01939ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01940ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEIN
Paelopatides01941-
Paelopatides01942-
Paelopatides01943PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
Paelopatides01944PROLYL 4-HYDROXYLASE ALPHA SUBUNIT
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