About Pseudoliparis swirei

The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Pseudoliparis swireiChordatahadal snailfishDeep sea7,254the Mariana Trench (142°26′E, 11°07′N)2059687

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
NWPU_hadal_v1626.4MbChromosome2023JANBZZ01Northwestern Polytechnical UniversityPRJNA85295196.00%21,161

References
TitleJournalPubmed ID
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebratesElife38134226

Gene Information

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Gene IDDescription
HS04351HYALURONIC ACID-BINDING PROTEIN 4
HS04352INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA
HS04353INTERLEUKIN-27 RECEPTOR SUBUNIT ALPHA
HS04354CYTOCHROME P450 508A4-RELATED
HS04355UNCHARACTERIZED
HS04356CYTOCHROME P450 508A4-RELATED
HS04357CYTOCHROME P450 508A4-RELATED
HS04358CYTOCHROME P450 508A4-RELATED
HS04359HOOK PROTEINS
HS04360UNCHARACTERIZED
HS04361PHOSPHORIBOSYLFORMYLGLYCINAMIDINE SYNTHASE
HS04362TRANSPORTIN 3 AND IMPORTIN 13
HS04363
HS04364TRANSMEMBRANE PROTEIN CCDC163
HS04365METHYLMALONIC ACIDURIA AND HOMOCYSTINURIA TYPE C PROTEIN
HS04366GH08155P
HS04367ENOYL-COA HYDRATASE-RELATED
HS04368-
HS04369UNCHARACTERIZED
HS04370GUANINE NUCLEOTIDE EXCHANGE FACTOR
HS04371FIBRINOGEN/TENASCIN/ANGIOPOEITIN
HS04372DENTIN MATRIX PROTEIN 4 PROTEIN FAM20
HS04373TUMOR NECROSIS FACTOR FAMILY MEMBER
HS04374
HS04375JUN TRANSCRIPTION FACTOR-RELATED
HS04376MCG48959-RELATED
HS04377SPHINGOSINE-1-PHOSPHATE PHOSPHOHYDROLASE
HS04378DIMETHYLANILINE MONOOXYGENASE
HS04379DIMETHYLANILINE MONOOXYGENASE
HS04380DIMETHYLANILINE MONOOXYGENASE
HS04381DIMETHYLANILINE MONOOXYGENASE
HS04382BAT2 HLA-B-ASSOCIATED TRANSCRIPT 2
HS04383OLFACTOMEDIN-RELATED
HS04384
HS04385
HS04386RAN GUANINE NUCLEOTIDE RELEASE FACTOR
HS04387INOSINE TRIPHOSPHATE PYROPHOSPHATASE/HAM1 PROTEIN
HS04388SAM-DEPENDENT METHYLTRANSFERASE SUPERFAMILY PROTEIN
HS04389DYNAMIN
HS04390PHOSPHATIDYLINOSITOL GLYCAN, CLASS C
HS04391TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN
HS04392MEMBRANE PROTEIN CH1 RELATED
HS04393EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED
HS04394METALLOENDOPEPTIDASE OMA1
HS04395
HS04396PID DOMAIN-CONTAINING PROTEIN
HS04397MAP/MICROTUBULE AFFINITY-REGULATING KINASE
HS04398LIPID PHOSPHATE PHOSPHATASE
HS04399
HS04400ENDONUCLEASE-RELATED
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