The Mariana snailfish or Mariana hadal snailfish Pseudoliparis swirei is a species of snailfish found in the Mariana Trench in the western Pacific Ocean. It is known from a depth range of 6,198–8,076 m,which is possibly the record for a fish caught on the seafloor. Various anatomical, physiological, molecular and genetic adaptions help this species survive in such depths. It is abundant in their deep-sea habitat and has several unusual adaptions for its dark and high pressure habitat, including transparent skin that lacks pigment, certain organs and eggs that are enlarged, the muscles are thinner, the ossification of its bones (notably the skull) is incomplete.
Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
---|---|---|---|---|---|---|
Pseudoliparis swirei | Chordata | hadal snailfish | Deep sea | 7,254 | the Mariana Trench (142°26′E, 11°07′N) | 2059687 |
Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
---|---|---|---|---|---|---|---|---|
NWPU_hadal_v1 | 626.4Mb | Chromosome | 2023 | JANBZZ01 | Northwestern Polytechnical University | PRJNA852951 | 96.00% | 21,161 |
Title | Journal | Pubmed ID |
---|---|---|
Chromosome-level genome assembly of hadal snailfish reveals mechanisms of deep-sea adaptation in vertebrates | Elife | 38134226 |
Gene ID | Description |
---|---|
HS04301 | |
HS04302 | HYDROXYSTEROID (11-BETA) DEHYDROGENASE 1-LIKE B-RELATED |
HS04303 | MICOS COMPLEX SUBUNIT MIC13 |
HS04304 | SPINDLIN |
HS04305 | SPINDLIN |
HS04306 | KALLIKREIN-RELATED |
HS04307 | KALLIKREIN-RELATED |
HS04308 | FIBROBLAST GROWTH FACTOR |
HS04309 | DNA-DIRECTED RNA POLYMERASE, MITOCHONDRIAL |
HS04310 | I[[H]] CHANNEL, ISOFORM E |
HS04311 | E3 UBIQUITIN-PROTEIN LIGASE PRAJA |
HS04312 | BASIGIN RELATED |
HS04313 | |
HS04314 | FOLLISTATIN-RELATED |
HS04315 | VOLTAGE-DEPENDENT CALCIUM CHANNEL BETA SUBUNIT-ASSOCIATED REGULATORY PROTEIN |
HS04316 | ATP SYNTHASE DELTA/EPSILON CHAIN |
HS04317 | MIDNOLIN |
HS04318 | KALLIKREIN-RELATED |
HS04319 | FERREDOXIN-RELATED |
HS04320 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP |
HS04321 | NAD(P)H-HYDRATE EPIMERASE |
HS04322 | TRANSCRIPTIONAL REPRESSOR P66-RELATED |
HS04323 | UNCHARACTERIZED |
HS04324 | SOLUTE CARRIER FAMILY 25 |
HS04325 | RE42071P |
HS04326 | SERUM RESPONSE FACTOR HOMOLOG |
HS04327 | TRANSMEMBRANE PROTEIN 221 |
HS04328 | MEF2B PROTEIN |
HS04329 | |
HS04330 | AGGRECAN/VERSICAN PROTEOGLYCAN |
HS04331 | AGGRECAN/VERSICAN PROTEOGLYCAN |
HS04332 | SI:CH211-196P9.1-RELATED |
HS04333 | TRANSMEMBRANE SUPERFAMILY 6 MEMBER 1/2 |
HS04334 | STRAWBERRY NOTCH-RELATED |
HS04335 | TIGHT JUNCTION PROTEIN |
HS04336 | SPERMATHECAL PHYSIOLOGY VARIANT |
HS04337 | DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC1 |
HS04338 | GLUTATHIONE PEROXIDASE |
HS04339 | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE |
HS04340 | DRAB11-RELATED |
HS04341 | DRAB11-RELATED |
HS04342 | E3 UBIQUITIN-PROTEIN LIGASE MARCH 2/3 FAMILY MEMBER |
HS04343 | SIGNAL-TRANSDUCING ADAPTOR PROTEIN-RELATED |
HS04344 | E3 UBIQUITIN-PROTEIN LIGASE TRIM36-RELATED |
HS04345 | SEMAPHORIN |
HS04346 | SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP |
HS04347 | CHROMATIN ASSEMBLY FACTOR 1 SUBUNIT A CAF-1 SUBUNIT A |
HS04348 | UBX-RELATED |
HS04349 | UDP- GLUCOSE PYROPHOSPHORYLASE |
HS04350 | TYROSINE-PROTEIN KINASE RECEPTOR |