Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00407510 | GLUTATHIONE S-TRANSFERASE-RELATED |
| SKAU_T00407520 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| SKAU_T00407530 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| SKAU_T00407540 | NUCLEOPORIN-LIKE PROTEIN 2 |
| SKAU_T00407550 | KELCH PROTEIN |
| SKAU_T00407560 | |
| SKAU_T00407570 | HYCCIN RELATED |
| SKAU_T00407580 | ANTIGEN BSP, PUTATIVE-RELATED |
| SKAU_T00407590 | CYCLIC-AMP RESPONSE ELEMENT BINDING PROTEIN |
| SKAU_T00407600 | SKICH DOMAIN-CONTAINING PROTEIN |
| SKAU_T00407610 | JUXTAPOSED WITH ANOTHER ZINC FINGER PROTEIN 1 |
| SKAU_T00407620 | |
| SKAU_T00407630 | |
| SKAU_T00407640 | CHIMERIN FAMILY MEMBER |
| SKAU_T00407650 | - |
| SKAU_T00407660 | |
| SKAU_T00407670 | PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP7/14 |
| SKAU_T00407680 | SESQUIPEDALIAN |
| SKAU_T00407690 | COLLAGEN ALPHA |
| SKAU_T00407700 | BIOTINIDASE-RELATED |
| SKAU_T00407710 | SORTING NEXIN |
| SKAU_T00407720 | NXPE FAMILY MEMBER |
| SKAU_T00407730 | STEREOCILIN RELATED |
| SKAU_T00407740 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
| SKAU_T00407750 | UBIQUITIN ASSOCIATED PROTEIN 2-LIKE/LINGERER |
| SKAU_T00407760 | SMAD |
| SKAU_T00407770 | |
| SKAU_T00407780 | SNARE-ASSOCIATED PROTEIN SNAPIN |
| SKAU_T00407790 | CHROMATIN TARGET OF PRMT1 PROTEIN |
| SKAU_T00407800 | |
| SKAU_T00407810 | |
| SKAU_T00407820 | GUANYLYL CYCLASE |
| SKAU_T00407830 | GUANYLYL CYCLASE |
| SKAU_T00407840 | INTEGRATOR COMPLEX SUBUNIT 3 |
| SKAU_T00407850 | |
| SKAU_T00407860 | YY1 ASSOCIATED PROTEIN-RELATED |
| SKAU_T00407870 | YY1 ASSOCIATED PROTEIN-RELATED |
| SKAU_T00407880 | PROTEIN DISULFIDE ISOMERASE |
| SKAU_T00407890 | CHAPERONIN |
| SKAU_T00407900 | GLYCOSYLATED LYSOSOMAL MEMBRANE PROTEIN |
| SKAU_T00407910 | TRANSMEMBRANE PROTEIN 79 |
| SKAU_T00407920 | |
| SKAU_T00407930 | MITOCHONDRIAL DISTRIBUTION REGULATOR MISATO |
| SKAU_T00407940 | UBIQUITIN ASSOCIATED PROTEIN 2-LIKE/LINGERER |
| SKAU_T00407950 | SYNAPTOTAGMIN |
| SKAU_T00407960 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00407970 | PEROXISOMAL BIOGENESIS FACTOR 11 |
| SKAU_T00407980 | |
| SKAU_T00407990 | |
| SKAU_T00408000 | RAS-LIKE FAMILY MEMBER 11 |
