Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00409010 | G DOMAIN-CONTAINING PROTEIN |
| SKAU_T00409020 | UBIQUITIN-LIKE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00409030 | |
| SKAU_T00409040 | |
| SKAU_T00409050 | T-LYMPHOCYTE ACTIVATION ANTIGEN |
| SKAU_T00409060 | G DOMAIN-CONTAINING PROTEIN |
| SKAU_T00409070 | T-CELL RECEPTOR ALPHA CHAIN V REGION-RELATED |
| SKAU_T00409080 | |
| SKAU_T00409090 | SUPPRESSOR OF ACTIN MUTATIONS 2/VACUOLAR PROTEIN SORTING 52 |
| SKAU_T00409100 | 30S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18 |
| SKAU_T00409110 | E3 UBIQUITIN-PROTEIN LIGASE RING1 / RING 2 FAMILY MEMBER |
| SKAU_T00409120 | ZINC TRANSPORTER SLC39A7 HISTIDINE-RICH MEMBRANE PROTEIN KE4 |
| SKAU_T00409130 | NEUROPEPTIDE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00409140 | |
| SKAU_T00409150 | |
| SKAU_T00409160 | PROTEIN SIDEKICK |
| SKAU_T00409170 | |
| SKAU_T00409180 | |
| SKAU_T00409190 | |
| SKAU_T00409200 | |
| SKAU_T00409210 | |
| SKAU_T00409220 | |
| SKAU_T00409230 | POLYAMINE-MODULATED FACTOR 1 |
| SKAU_T00409240 | CREB-REGULATED TRANSCRIPTION COACTIVATOR |
| SKAU_T00409250 | ZINC/IRON TRANSPORTER |
| SKAU_T00409260 | JTB PROTEIN-RELATED |
| SKAU_T00409270 | |
| SKAU_T00409280 | COCAINE AND AMPHETAMINE REGULATED TRANSCRIPT PROTEIN |
| SKAU_T00409290 | COCAINE AND AMPHETAMINE REGULATED TRANSCRIPT PROTEIN |
| SKAU_T00409300 | |
| SKAU_T00409310 | |
| SKAU_T00409320 | ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 |
| SKAU_T00409330 | PH DOMAIN-CONTAINING PROTEIN |
| SKAU_T00409340 | VESICLE PROTEIN SORTING-ASSOCIATED |
| SKAU_T00409350 | PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS CLASS F PROTEIN-RELATED |
| SKAU_T00409360 | ZINC FINGER PROTEIN |
| SKAU_T00409370 | METALLOPROTEASE TLDD |
| SKAU_T00409380 | RFX TRANSCRIPTION FACTOR FAMILY |
| SKAU_T00409390 | |
| SKAU_T00409400 | |
| SKAU_T00409410 | |
| SKAU_T00409420 | |
| SKAU_T00409430 | NUCLEAR HORMONE RECEPTOR |
| SKAU_T00409440 | |
| SKAU_T00409450 | COLLAGEN ALPHA |
| SKAU_T00409460 | SHORT-CHAIN DEHYDROGENASES/REDUCTASES FAMILY MEMBER |
| SKAU_T00409470 | FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS |
| SKAU_T00409480 | METALLOPROTEASE TLDD |
| SKAU_T00409490 | METALLOPROTEASE TLDD |
| SKAU_T00409500 | METALLOPROTEASE TLDD |
