Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00406010 | TON-B BOX DOMAIN |
| SKAU_T00406020 | CARNITINE O-ACYLTRANSFERASE |
| SKAU_T00406030 | PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1 |
| SKAU_T00406040 | RIBOSOMAL PROTEIN S7 |
| SKAU_T00406050 | DIMETHYLARGININE DIMETHYLAMINOHYDROLASE |
| SKAU_T00406060 | |
| SKAU_T00406070 | CHLORIDE INTRACELLULAR CHANNEL PROTEIN 6-RELATED |
| SKAU_T00406080 | |
| SKAU_T00406090 | SPERM ACROSOME MEMBRANE-ASSOCIATED PROTEIN 4 |
| SKAU_T00406100 | NEGATIVE ELONGATION FACTOR E |
| SKAU_T00406110 | AGAP004733-PA |
| SKAU_T00406120 | |
| SKAU_T00406130 | |
| SKAU_T00406140 | G9A, ISOFORM B |
| SKAU_T00406150 | CHOLINE TRANSPORTER-LIKE (SLC FAMILY 44) |
| SKAU_T00406160 | |
| SKAU_T00406170 | E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED |
| SKAU_T00406180 | MHC CLASS I-RELATED |
| SKAU_T00406190 | |
| SKAU_T00406200 | LIM/HOMEOBOX PROTEIN LHX |
| SKAU_T00406210 | HISTONE H3.2 |
| SKAU_T00406220 | METALLOPROTEASE TLDD |
| SKAU_T00406230 | TENASCIN |
| SKAU_T00406240 | |
| SKAU_T00406250 | - |
| SKAU_T00406260 | |
| SKAU_T00406270 | |
| SKAU_T00406280 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00406290 | SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL |
| SKAU_T00406300 | LEUCINE-RICH REPEAT-CONTAINING PROTEIN 71 |
| SKAU_T00406310 | SMALL CONDUCTANCE CALCIUM-ACTIVATED POTASSIUM CHANNEL |
| SKAU_T00406320 | RUN AND SH3 DOMAIN CONTAINING |
| SKAU_T00406330 | HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 |
| SKAU_T00406340 | HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 |
| SKAU_T00406350 | HISTONE-LYSINE N-METHYLTRANSFERASE ASH1 |
| SKAU_T00406360 | |
| SKAU_T00406370 | |
| SKAU_T00406380 | E3 UBIQUITIN-PROTEIN LIGASE PRAJA |
| SKAU_T00406390 | SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP |
| SKAU_T00406400 | FATTY ACID BINDING PROTEIN |
| SKAU_T00406410 | MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21 |
| SKAU_T00406420 | CIRCADIAN-ASSOCIATED TRANSCRIPTIONAL REPRESSOR |
| SKAU_T00406430 | U4/U6-ASSOCIATED RNA SPLICING FACTOR-RELATED |
| SKAU_T00406440 | CYCLIN-DEPENDENT KINASE INHIBITOR-RELATED PROTEIN |
| SKAU_T00406450 | THREONINE-TRNA LIGASE |
| SKAU_T00406460 | RNA BINDING PROTEIN |
| SKAU_T00406470 | LONGEVITY ASSURANCE FACTOR 1 LAG1 |
| SKAU_T00406480 | |
| SKAU_T00406490 | APOLIPOPROTEIN |
| SKAU_T00406500 |
