Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00405510 | SYNTAXIN |
| SKAU_T00405520 | TRNA SELENOCYSTEINE 1-ASSOCIATED PROTEIN 1-RELATED |
| SKAU_T00405530 | SH3 DOMAIN-BINDING GLUTAMIC ACID-RICH-LIKE PROTEIN |
| SKAU_T00405540 | ADIPOR/PROGESTIN RECEPTOR-RELATED |
| SKAU_T00405550 | UNCHARACTERIZED |
| SKAU_T00405560 | LP06937P |
| SKAU_T00405570 | |
| SKAU_T00405580 | |
| SKAU_T00405590 | DNA-DIRECTED RNA POLYMERASES I, II, AND III |
| SKAU_T00405600 | RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING |
| SKAU_T00405610 | |
| SKAU_T00405620 | |
| SKAU_T00405630 | RNA BINDING PROTEIN |
| SKAU_T00405640 | 14-3-3 PROTEIN |
| SKAU_T00405650 | |
| SKAU_T00405660 | TRANSCRIPTION FACTOR CP2 |
| SKAU_T00405670 | CALCIUM BINDING PROTEINS |
| SKAU_T00405680 | |
| SKAU_T00405690 | |
| SKAU_T00405700 | |
| SKAU_T00405710 | TYROSINE-PROTEIN PHOSPHATASE NON-RECEPTOR TYPE 61F |
| SKAU_T00405720 | NUCLEAR PORE COMPLEX PROTEIN SEC13 / SEH1 FAMILY MEMBER |
| SKAU_T00405730 | |
| SKAU_T00405740 | |
| SKAU_T00405750 | LOW DENSITY LIPOPROTEIN RECEPTOR CLASS A DOMAIN-CONTAINING 4A |
| SKAU_T00405760 | |
| SKAU_T00405770 | UNCHARACTERIZED |
| SKAU_T00405780 | MRNA GUANINE-7- METHYLTRANSFERASE |
| SKAU_T00405790 | |
| SKAU_T00405800 | KRAB AND ZINC FINGER DOMAIN-CONTAINING |
| SKAU_T00405810 | TRANSCRIPTIONAL REPRESSOR PROTEIN YY |
| SKAU_T00405820 | |
| SKAU_T00405830 | IG-LIKE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00405840 | CELL SURFACE GLYCOPROTEIN MUC18-RELATED |
| SKAU_T00405850 | |
| SKAU_T00405860 | |
| SKAU_T00405870 | PIKACHURIN-LIKE PROTEIN |
| SKAU_T00405880 | VALYL-TRNA SYNTHETASES |
| SKAU_T00405890 | VALYL-TRNA SYNTHETASES |
| SKAU_T00405900 | PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1/ALPHA-1,3-MANNOSYL-GLYCOPROTEIN 2-BETA-N-ACETYLGLUCOSAMINYLTRANSFERASE |
| SKAU_T00405910 | ATP-DEPENDENT RNA HELICASE DBP3 |
| SKAU_T00405920 | DNA-DIRECTED RNA POLYMERASE |
| SKAU_T00405930 | RICIN B-TYPE LECTIN DOMAIN-CONTAINING PROTEIN |
| SKAU_T00405940 | TFIIH, POLYPEPTIDE 4 |
| SKAU_T00405950 | SH3 DOMAIN-BINDING PROTEIN 5 |
| SKAU_T00405960 | VALYL-TRNA SYNTHETASES |
| SKAU_T00405970 | E3 UBIQUITIN-PROTEIN LIGASE PPP1R11-RELATED |
| SKAU_T00405980 | C6ORF47 FAMILY MEMBER |
| SKAU_T00405990 | |
| SKAU_T00406000 | NURIM |
