Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00407010 | CINGULIN-LIKE PROTEIN 1-RELATED |
| SKAU_T00407020 | TROPOMYOSIN |
| SKAU_T00407030 | BETA-MICROSEMINOPROTEIN |
| SKAU_T00407040 | ALPHA-TECTORIN-RELATED |
| SKAU_T00407050 | EXTRACELLULAR MATRIX PROTEIN 1 |
| SKAU_T00407060 | PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE |
| SKAU_T00407070 | |
| SKAU_T00407080 | 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4 |
| SKAU_T00407090 | ZINC FINGER PROTEIN 532-RELATED |
| SKAU_T00407100 | NXPE FAMILY MEMBER |
| SKAU_T00407110 | NXPE FAMILY MEMBER |
| SKAU_T00407120 | |
| SKAU_T00407130 | |
| SKAU_T00407140 | |
| SKAU_T00407150 | |
| SKAU_T00407160 | SLIT HOMOLOG |
| SKAU_T00407170 | ANTIGEN BSP, PUTATIVE-RELATED |
| SKAU_T00407180 | |
| SKAU_T00407190 | NUCLEAR RECEPTOR COACTIVATOR |
| SKAU_T00407200 | LD21662P |
| SKAU_T00407210 | E3 UBIQUITIN-PROTEIN LIGASE TRIM |
| SKAU_T00407220 | CATION EFFLUX PROTEIN/ ZINC TRANSPORTER |
| SKAU_T00407230 | BITESIZE, ISOFORM I |
| SKAU_T00407240 | CYTOCHROME P450 508A4-RELATED |
| SKAU_T00407250 | CYTOCHROME P450 508A4-RELATED |
| SKAU_T00407260 | |
| SKAU_T00407270 | EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED |
| SKAU_T00407280 | |
| SKAU_T00407290 | ACETYLGLUCOSAMINYLTRANSFERASE |
| SKAU_T00407300 | MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 30 |
| SKAU_T00407310 | |
| SKAU_T00407320 | BETA/GAMMA CRYSTALLIN |
| SKAU_T00407330 | PR DOMAIN ZINC FINGER PROTEIN |
| SKAU_T00407340 | |
| SKAU_T00407350 | PROLYL ENDOPEPTIDASE |
| SKAU_T00407360 | EPH RECEPTOR A5 |
| SKAU_T00407370 | KRUEPPEL-LIKE TRANSCRIPTION FACTOR |
| SKAU_T00407380 | OS05G0300700 PROTEIN |
| SKAU_T00407390 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00407400 | INTERLEUKIN-6 |
| SKAU_T00407410 | |
| SKAU_T00407420 | SIMILAR TO PREFERENTIALLY EXPRESSED ANTIGEN IN MELANOMA-LIKE 3 |
| SKAU_T00407430 | UBIQUINOL-CYTOCHROME C REDUCTASE COMPLEX 14 KD PROTEIN |
| SKAU_T00407440 | CGI-12 PROTEIN-RELATED |
| SKAU_T00407450 | |
| SKAU_T00407460 | GEO13361P1-RELATED |
| SKAU_T00407470 | ADENYLYL CYCLASE-ASSOCIATED PROTEIN |
| SKAU_T00407480 | AURORA KINASE A AND NINEIN-INTERACTING PROTEIN |
| SKAU_T00407490 | VACUOLAR PROTEIN SORTING 28, ISOFORM 2 VPS28 |
| SKAU_T00407500 | MITOGEN-ACTIVATED PROTEIN KINASE |
