About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 693 694 695 696 697 698 699 700 701 702 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_037759-T1
OS493_037760-T1
OS493_037762-T1BONUS, ISOFORM C-RELATED
OS493_037763-T1TUMOR NECROSIS FACTOR INDUCED PROTEIN
OS493_037764-T1SIMILAR TO KIAA0825 PROTEIN
OS493_037765-T1SIMILAR TO KIAA0825 PROTEIN
OS493_037766-T1
OS493_037767-T1
OS493_037768-T1PROTEIN KINASE DOMAIN-CONTAINING PROTEIN
OS493_037769-T1
OS493_037770-T1
OS493_037771-T1LEUCINE RICH REPEAT FAMILY PROTEIN
OS493_037772-T1
OS493_037773-T1KINESIN-RELATED
OS493_037774-T1
OS493_037775-T1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
OS493_037776-T1
OS493_037777-T1
OS493_037778-T1
OS493_037779-T1
OS493_037780-T1
OS493_037781-T1
OS493_037782-T1UPF0573 PROTEIN C2ORF70
OS493_037783-T1RAB GTPASE-ACTIVATING PROTEIN 1-LIKE
OS493_037784-T1BLR2807 PROTEIN
OS493_037785-T1
OS493_037786-T1
OS493_037787-T1STEREOCILIN RELATED
OS493_037788-T1NETRIN RECEPTOR UNC5
OS493_037789-T1ABC TRANSPORTER G FAMILY MEMBER 28
OS493_037790-T1ABC TRANSPORTER G FAMILY MEMBER 28
OS493_037791-T1
OS493_037792-T1
OS493_037793-T1ABC TRANSPORTER G FAMILY MEMBER 28
OS493_037794-T1ABC TRANSPORTER G FAMILY MEMBER 28
OS493_037795-T1ABC TRANSPORTER G FAMILY MEMBER 28
OS493_037796-T1ABC TRANSPORTER G FAMILY MEMBER 28
OS493_037798-T1ACETYL-COA C-ACETYLTRANSFERASE
OS493_037799-T1
OS493_037800-T1
OS493_037801-T1CARBOXYLESTERASE
OS493_037802-T1NEUROLIGIN
OS493_037803-T1CARBOXYLESTERASE
OS493_037804-T1NEUROLIGIN
OS493_037805-T1CARBOXYLESTERASE
OS493_037806-T1NEUROLIGIN
OS493_037807-T1CARBOXYLESTERASE
OS493_037808-T1NEUROLIGIN
OS493_037809-T1ENHANCER OF MRNA-DECAPPING PROTEIN 4
OS493_037810-T1
TOP