About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

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Gene IDDescription
OS493_033731-T1-
OS493_033732-T1
OS493_033733-T1NG37
OS493_033734-T1NG37
OS493_033735-T1NG37
OS493_033736-T1NG37
OS493_033737-T12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
OS493_033738-T1
OS493_033739-T1
OS493_033740-T1
OS493_033741-T1
OS493_033742-T1BTB DOMAIN-CONTAINING PROTEIN
OS493_033743-T1
OS493_033744-T1SWI5-DEPENDENT RECOMBINATION DNA REPAIR PROTEIN 1 HOMOLOG
OS493_033745-T1UNCHARACTERIZED
OS493_033746-T1RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY
OS493_033747-T1
OS493_033748-T1UNCHARACTERIZED
OS493_033749-T1UNCHARACTERIZED
OS493_033750-T1PROPROTEIN CONVERTASE SUBTILISIN/KEXIN-RELATED
OS493_033751-T1DECARBOXYLATING DEHYDROGENASES-ISOCITRATE, ISOPROPYLMALATE, TARTRATE
OS493_033752-T12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
OS493_033753-T12-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED
OS493_033754-T1REDUCED GROWTH PHENOTYPE 1 RGP1, YEAST -RELATED
OS493_033755-T1
OS493_033756-T1CELL FATE DETERMINING PROTEIN MAB21-RELATED
OS493_033757-T1PYM PROTEIN
OS493_033758-T1
OS493_033759-T1CYTOCHROME C OXIDASE POLYPEPTIDE
OS493_033760-T1
OS493_033761-T1
OS493_033762-T1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
OS493_033763-T1
OS493_033764-T1
OS493_033765-T1
OS493_033766-T1
OS493_033767-T1
OS493_033768-T1UBIQUITIN-ACTIVATING ENZYME E1
OS493_033769-T1UBIQUITIN-ACTIVATING ENZYME E1
OS493_033770-T1
OS493_033771-T1UBIQUITIN-ACTIVATING ENZYME E1
OS493_033772-T1
OS493_033773-T1
OS493_033775-T1POTE ANKYRIN DOMAIN
OS493_033776-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_033777-T1ALDEHYDE DEHYDROGENASE-RELATED
OS493_033778-T1COLLAGEN ALPHA
OS493_033779-T1
OS493_033780-T1UNCHARACTERIZED
OS493_033781-T1COLLAGEN ALPHA
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