About Lophelia pertusa

Lophelia pertusa is a cold-water coral that grows in the deep waters throughout the North Atlantic ocean, as well as parts of the Caribbean Sea and Alboran Sea. Although their reefs are home to a diverse community, the species is extremely slow growing and may be harmed by destructive fishing practices, or oil exploration and extraction. They does not contain zooxanthellae, the symbiotic algae which lives inside most tropical reef building corals. Lophelia lives at a temperature range from about 4–12 °C and at depths between 80 metres and over 3,000 metres, but most commonly at depths of 200–1,000 metres, where there is no sunlight.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lophelia pertusaCnidariaDesmophyllum pertusum, deep-sea coralHydrothermal vent50-3,600Savannah Banks site, off the southeastern coast of the continental USA, Atlantic Ocean (latitude 31.75420, longitude 79.19442)174260

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
Loph_1.0556.9MbScaffold2023JAPMOT01Lehigh UniversityPRJNA90394988.90%37,484

References
TitleJournalPubmed ID
Genome assembly of the deep-sea coral Lophelia pertusaGigaByte36935863

Gene Information

<< First 615 616 617 618 619 620 621 622 623 624 Forward> Last>>        750 pages in total

Gene IDDescription
OS493_033521-T1
OS493_033522-T1DIABETES AND OBESITY REGULATED, ISOFORM G
OS493_033523-T1ZGC:162297
OS493_033524-T1CYCLINS
OS493_033525-T1
OS493_033526-T15-OXOPROLINASE RELATED
OS493_033527-T1BCDNA.GH03377
OS493_033528-T1PHOSPHOETHANOLAMINE METHYLTRANSFERASE
OS493_033529-T1TRANS-SULFURATION ENZYME FAMILY MEMBER
OS493_033530-T1
OS493_033531-T1
OS493_033532-T1GPI TRANSAMIDASE COMPONENT PIG-U
OS493_033533-T1
OS493_033534-T1UNCHARACTERIZED
OS493_033535-T1BONUS, ISOFORM C-RELATED
OS493_033536-T1BONUS, ISOFORM C-RELATED
OS493_033537-T1
OS493_033538-T1UNCHARACTERIZED
OS493_033539-T1UNCHARACTERIZED
OS493_033540-T1PLEXUS, ISOFORM A
OS493_033541-T1PLEXUS, ISOFORM A
OS493_033542-T1GENETIC SUPPRESSOR ELEMENT 1
OS493_033543-T1DNA REPLICATION COMPLEX GINS PROTEIN PSF2
OS493_033544-T1DNA REPLICATION COMPLEX GINS PROTEIN PSF2
OS493_033545-T1VACUOLAR ATP SYNTHASE SUBUNIT AC39
OS493_033546-T1
OS493_033547-T1AAA DOMAIN-CONTAINING
OS493_033548-T1PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT SDS22-RELATED
OS493_033549-T1
OS493_033550-T1CALCIUM-TRANSPORTING ATPASE
OS493_033551-T1RIKEN CDNA 6820408C15
OS493_033552-T1RIKEN CDNA 6820408C15
OS493_033553-T1
OS493_033554-T1CYTOCHROME C OXIDASE SUBUNIT IV
OS493_033555-T1SHORT-CHAIN DEHYDROGENASE/REDUCTASE
OS493_033556-T1NACHT DOMAIN-CONTAINING PROTEIN
OS493_033557-T1PROTEIN CBG05131
OS493_033558-T1INTELECTIN
OS493_033559-T1INTELECTIN
OS493_033560-T1INTELECTIN
OS493_033561-T1INTELECTIN
OS493_033562-T1INTELECTIN
OS493_033563-T1
OS493_033564-T1
OS493_033565-T1CAVEOLIN
OS493_033566-T1CAVEOLIN
OS493_033567-T1INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN
OS493_033568-T1
OS493_033569-T1ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED
OS493_033570-T1SODIUM/CHLORIDE DEPENDENT TRANSPORTER
TOP