Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00308010 | NEUROTRANSMITTER GATED ION CHANNEL |
| SKAU_T00308020 | |
| SKAU_T00308030 | SECRETORY CARRIER-ASSOCIATED MEMBRANE PROTEIN SCAMP |
| SKAU_T00308040 | HEAVYWEIGHT, ISOFORM A |
| SKAU_T00308050 | |
| SKAU_T00308060 | |
| SKAU_T00308070 | LYSYL OXIDASE-LIKE-RELATED |
| SKAU_T00308080 | |
| SKAU_T00308090 | - |
| SKAU_T00308100 | |
| SKAU_T00308110 | BUTYROPHILIN |
| SKAU_T00308120 | UBIQUILIN |
| SKAU_T00308130 | |
| SKAU_T00308140 | |
| SKAU_T00308150 | |
| SKAU_T00308160 | |
| SKAU_T00308170 | |
| SKAU_T00308180 | |
| SKAU_T00308190 | ACTIN BUNDLING/MISSING IN METASTASIS-RELATED |
| SKAU_T00308200 | ACTIN BUNDLING/MISSING IN METASTASIS-RELATED |
| SKAU_T00308210 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| SKAU_T00308220 | PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED |
| SKAU_T00308230 | |
| SKAU_T00308240 | |
| SKAU_T00308250 | PROTEIN SIDEKICK |
| SKAU_T00308260 | |
| SKAU_T00308270 | POLY ADP-RIBOSE POLYMERASE FAMILY, MEMBER PARP |
| SKAU_T00308280 | CARTILAGE INTERMEDIATE LAYER PROTEIN CLIP |
| SKAU_T00308290 | EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT J |
| SKAU_T00308300 | NAD P H OXIDOREDUCTASE-RELATED |
| SKAU_T00308310 | DULLARD PROTEIN PHOSPHATASE |
| SKAU_T00308320 | GOLGI PHOSPHOPROTEIN 2/GP73-RELATED |
| SKAU_T00308330 | PROTEIN FAM189A |
| SKAU_T00308340 | |
| SKAU_T00308350 | TIGHT JUNCTION PROTEIN |
| SKAU_T00308360 | |
| SKAU_T00308370 | |
| SKAU_T00308380 | |
| SKAU_T00308390 | |
| SKAU_T00308400 | NADPH OXIDASE |
| SKAU_T00308410 | DUAL OXIDASE 2 |
| SKAU_T00308420 | SYNTENIN RELATED |
| SKAU_T00308430 | |
| SKAU_T00308440 | METHYLMALONYL-COA EPIMERASE |
| SKAU_T00308450 | U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN MPP10 |
| SKAU_T00308460 | FANCONI-ASSOCIATED NUCLEASE 1 |
| SKAU_T00308470 | MYOTUBULARIN-RELATED |
| SKAU_T00308480 | UNCHARACTERIZED |
| SKAU_T00308490 | |
| SKAU_T00308500 | MYOSIN |
