Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00309510 | |
| SKAU_T00309520 | SORTING NEXIN |
| SKAU_T00309530 | SNURPORTIN1 RNUT1 PROTEIN RNA, U TRANSPORTER 1 |
| SKAU_T00309540 | RECEPTOR-TYPE TYROSINE-PROTEIN PHOSPHATASE |
| SKAU_T00309550 | SIN3B-RELATED |
| SKAU_T00309560 | |
| SKAU_T00309570 | FATTY ACID BINDING PROTEIN |
| SKAU_T00309580 | WD REPEAT-CONTAINING PROTEIN 61 |
| SKAU_T00309590 | SOLUTE CARRIER FAMILY 25 MEMBER 44 |
| SKAU_T00309600 | |
| SKAU_T00309610 | TROPOMODULIN |
| SKAU_T00309620 | RAB GTPASE-ACTIVATING PROTEIN 1-LIKE |
| SKAU_T00309630 | L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+)) |
| SKAU_T00309640 | YEAST SPT2-RELATED |
| SKAU_T00309650 | GH04784P |
| SKAU_T00309660 | TITIN |
| SKAU_T00309670 | MEMBRANE ASSOCIATED GUANYLATE KINASE-RELATED |
| SKAU_T00309680 | TEASHIRT-RELATED |
| SKAU_T00309690 | |
| SKAU_T00309700 | |
| SKAU_T00309710 | |
| SKAU_T00309720 | |
| SKAU_T00309730 | |
| SKAU_T00309740 | |
| SKAU_T00309750 | |
| SKAU_T00309760 | |
| SKAU_T00309770 | |
| SKAU_T00309780 | |
| SKAU_T00309790 | |
| SKAU_T00309800 | ZINC FINGER PROTEIN |
| SKAU_T00309810 | CADHERIN-23 |
| SKAU_T00309820 | |
| SKAU_T00309830 | ZINC FINGER PROTEIN |
| SKAU_T00309840 | |
| SKAU_T00309850 | |
| SKAU_T00309860 | |
| SKAU_T00309870 | |
| SKAU_T00309880 | |
| SKAU_T00309890 | |
| SKAU_T00309900 | CYCLINS |
| SKAU_T00309910 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED |
| SKAU_T00309920 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED |
| SKAU_T00309930 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED |
| SKAU_T00309940 | PLECKSTRIN HOMOLOGY DOMAIN-CONTAINING FAMILY F MEMBER 2-RELATED |
| SKAU_T00309950 | RIBONUCLEASE P SUBUNIT P29 |
| SKAU_T00309960 | V-SET AND TRANSMEMBRANE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00309970 | NINJURIN-RELATED |
| SKAU_T00309980 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00309990 | SHC SH2-DOMAIN BINDING PROTEIN 1-RELATED |
| SKAU_T00310000 |
