Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00307010 | EGF-LIKE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00307020 | |
| SKAU_T00307030 | SARCOSINE DEHYDROGENASE-RELATED |
| SKAU_T00307040 | SELECTIN LIGAND RELATED |
| SKAU_T00307050 | RFWD3 PROTEIN |
| SKAU_T00307060 | SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED |
| SKAU_T00307070 | GATOR COMPLEX PROTEIN WDR59 |
| SKAU_T00307080 | RNA-BINDING PROTEIN NOB1 |
| SKAU_T00307090 | CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 8 |
| SKAU_T00307100 | CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7 |
| SKAU_T00307110 | TRANSMEMBRANE EMP24 DOMAIN-CONTAINING PROTEIN |
| SKAU_T00307120 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| SKAU_T00307130 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN |
| SKAU_T00307140 | URICASE AND TRANSTHYRETIN-RELATED |
| SKAU_T00307150 | PROGRAMMED CELL DEATH PROTEIN 5 |
| SKAU_T00307160 | DIPHOSPHOMEVALONATE DECARBOXYLASE |
| SKAU_T00307170 | CYTOCHROME B-245 LIGHT CHAIN |
| SKAU_T00307180 | NULP1-RELATED |
| SKAU_T00307190 | G-PROTEIN COUPLED RECEPTOR |
| SKAU_T00307200 | REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN |
| SKAU_T00307210 | TUBULIN |
| SKAU_T00307220 | PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN |
| SKAU_T00307230 | ATP-DEPENDENT PROTEASE |
| SKAU_T00307240 | DYSTROBREVIN BINDING PROTEIN 1 DYSBINDIN |
| SKAU_T00307250 | DYNEIN REGULATORY COMPLEX SUBUNIT 4 |
| SKAU_T00307260 | PROTEIN CBG26694 |
| SKAU_T00307270 | CARBOXYLESTERASE |
| SKAU_T00307280 | 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE-RELATED |
| SKAU_T00307290 | FORKHEAD BOX PROTEIN BINIOU |
| SKAU_T00307300 | |
| SKAU_T00307310 | |
| SKAU_T00307320 | |
| SKAU_T00307330 | |
| SKAU_T00307340 | TRANSCRIPTION INTERMEDIARY FACTOR |
| SKAU_T00307350 | RAS-LIKE FAMILY MEMBER 11 |
| SKAU_T00307360 | LD11652P |
| SKAU_T00307370 | TUBBY-RELATED |
| SKAU_T00307380 | LY6/PLAUR DOMAIN-CONTAINING PROTEIN 8 |
| SKAU_T00307390 | RAS, DI-RAS, AND RHEB FAMILY MEMBERS OF SMALL GTPASE SUPERFAMILY |
| SKAU_T00307400 | COATOMER SUBUNIT BETA |
| SKAU_T00307410 | |
| SKAU_T00307420 | PROTEASOME SUBUNIT ALPHA/BETA |
| SKAU_T00307430 | CYCLIC NUCLEOTIDE PHOSPHODIESTERASE |
| SKAU_T00307440 | CALCITONIN-RELATED |
| SKAU_T00307450 | |
| SKAU_T00307460 | INSCUTEABLE |
| SKAU_T00307470 | |
| SKAU_T00307480 | |
| SKAU_T00307490 | |
| SKAU_T00307500 | PHOSPHOINOSITOL 3-PHOSPHATE-BINDING PROTEIN |
