Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00305010 | PROTHROMBIN |
| SKAU_T00305020 | FOUR-JOINTED BOX PROTEIN 1 |
| SKAU_T00305030 | B-BOX DOMAIN CONTAINING |
| SKAU_T00305040 | |
| SKAU_T00305050 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR, TWIST |
| SKAU_T00305060 | INTERFERON REGULATORY FACTOR |
| SKAU_T00305070 | PHD AND RING FINGER DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00305080 | RAS-ASSOCIATING DOMAIN CONTAINING PROTEIN |
| SKAU_T00305090 | UNCHARACTERIZED |
| SKAU_T00305100 | L-2-HYDROXYCARBOXYLATE DEHYDROGENASE (NAD(P)(+)) |
| SKAU_T00305110 | TUMOR SUSCEPTIBILITY GENE 101 PROTEIN-RELATED |
| SKAU_T00305120 | |
| SKAU_T00305130 | |
| SKAU_T00305140 | |
| SKAU_T00305150 | ALPHA-KETOGLUTARATE-DEPENDENT DIOXYGENASE ALKB HOMOLOG 3 |
| SKAU_T00305160 | RH59310P |
| SKAU_T00305170 | TTC17 PROTEIN |
| SKAU_T00305180 | TTC17 PROTEIN |
| SKAU_T00305190 | APOPTOSIS INHIBITOR 5-RELATED |
| SKAU_T00305200 | TNF RECEPTOR ASSOCIATED FACTOR |
| SKAU_T00305210 | TARGET OF RAPAMYCIN COMPLEX 2 SUBUNIT BIT61-RELATED |
| SKAU_T00305220 | COMM DOMAIN-CONTAINING PROTEIN 9 |
| SKAU_T00305230 | L-FUCOSE KINASE |
| SKAU_T00305240 | PHOSPHATIDYLINOSITOL SYNTHASE |
| SKAU_T00305250 | TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6 |
| SKAU_T00305260 | |
| SKAU_T00305270 | |
| SKAU_T00305280 | PROTEIN-TYROSINE-PHOSPHATASE |
| SKAU_T00305290 | AROMATIC AMINO ACID HYDROXYLASE |
| SKAU_T00305300 | |
| SKAU_T00305310 | INSULIN-LIKE GROWTH FACTOR II |
| SKAU_T00305320 | |
| SKAU_T00305330 | |
| SKAU_T00305340 | GLYCOSIDASE FAMILY 31 |
| SKAU_T00305350 | CARNITINE O-ACYLTRANSFERASE |
| SKAU_T00305360 | CYSTEINYL-TRNA SYNTHETASE |
| SKAU_T00305370 | TESTIS-SPECIFIC Y-ENCODED PROTEIN |
| SKAU_T00305380 | |
| SKAU_T00305390 | PLECKSTRIN HOMOLOGY-LIKE DOMAIN, PQ-RICH PROTEIN |
| SKAU_T00305400 | |
| SKAU_T00305410 | OXYSTEROL-BINDING PROTEIN-RELATED |
| SKAU_T00305420 | CYTOKINE RECEPTOR |
| SKAU_T00305430 | CYTOKINE RECEPTOR |
| SKAU_T00305440 | INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN |
| SKAU_T00305450 | INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN |
| SKAU_T00305460 | INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN |
| SKAU_T00305470 | INTERFERON INDUCIBLE TRANSMEMBRANE PROTEIN |
| SKAU_T00305480 | OXIDOREDUCTASE-RELATED |
| SKAU_T00305490 | POTASSIUM VOLTAGE-GATED CHANNEL SUBFAMILY KQT MEMBER 4 |
| SKAU_T00305500 |
