Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00306510 | IROQUOIS-CLASS HOMEODOMAIN PROTEIN IRX |
| SKAU_T00306520 | |
| SKAU_T00306530 | |
| SKAU_T00306540 | |
| SKAU_T00306550 | MATRIX METALLOPROTEINASE |
| SKAU_T00306560 | |
| SKAU_T00306570 | SODIUM/CHLORIDE DEPENDENT TRANSPORTER |
| SKAU_T00306580 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00306590 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00306600 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00306610 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00306620 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00306630 | GTPASE, IMAP FAMILY MEMBER-RELATED |
| SKAU_T00306640 | SOLUTE CARRIER FAMILY 12, CATION COTRANSPORTERS |
| SKAU_T00306650 | MICROSOMAL DIPEPTIDASE |
| SKAU_T00306660 | E3 UBIQUITIN-PROTEIN LIGASE RNF8 |
| SKAU_T00306670 | CELL ADHESION MOLECULE |
| SKAU_T00306680 | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED |
| SKAU_T00306690 | NFAT |
| SKAU_T00306700 | LEUCOKININ RECEPTOR-RELATED |
| SKAU_T00306710 | CHYMOTRYPSIN-RELATED |
| SKAU_T00306720 | |
| SKAU_T00306730 | CHYMOTRYPSIN-RELATED |
| SKAU_T00306740 | AGOUTI RELATED |
| SKAU_T00306750 | VACUOLAR ATP SYNTHASE SUBUNIT AC39 |
| SKAU_T00306760 | SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9C |
| SKAU_T00306770 | ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN |
| SKAU_T00306780 | P25 ALPHA-RELATED |
| SKAU_T00306790 | RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR-RELATED |
| SKAU_T00306800 | |
| SKAU_T00306810 | |
| SKAU_T00306820 | SODIUM/HYDROGEN EXCHANGER |
| SKAU_T00306830 | FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I |
| SKAU_T00306840 | FORMIN HOMOLOGY 2 DOMAIN CONTAINING, ISOFORM I |
| SKAU_T00306850 | |
| SKAU_T00306860 | CCAAT/ENHANCER BINDING PROTEIN |
| SKAU_T00306870 | G PATCH DOMAIN-CONTAINING PROTEIN 1 |
| SKAU_T00306880 | TRANSPOSABLE ELEMENT-RELATED |
| SKAU_T00306890 | LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATED |
| SKAU_T00306900 | AMINO ACID TRANSPORTER |
| SKAU_T00306910 | RHOPHILIN |
| SKAU_T00306920 | CENTROSOMAL PROTEIN OF 89 KDA |
| SKAU_T00306930 | E3 UBIQUITIN-PROTEIN LIGASE RNF182 |
| SKAU_T00306940 | CENTROSOMAL PROTEIN OF 89 KDA |
| SKAU_T00306950 | TESTOSTERONE-REGULATED PROTEIN RP2 |
| SKAU_T00306960 | UNCHARACTERIZED |
| SKAU_T00306970 | R-SEVEN BINDING PROTEIN (R7BP) HOMOLOG |
| SKAU_T00306980 | ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 27 |
| SKAU_T00306990 | |
| SKAU_T00307000 | CYSTEINE-RICH SECRETORY PROTEIN-RELATED |
