Synaphobranchus kaupii, also known as Kaup's arrowtooth eel, is an eel in the family Synaphobranchidae. It is a marine, deep water-dwelling eel which is known from the Indo-Western Pacific and eastern and western Atlantic Ocean. It dwells at a depth range of 120 to 4,800 metres, and inhabits the upper abyssal zone on the continental slope.
| Species | Phylum | Common Name | Ecosystem | Depth | Habitat | NCBI Taxonomy ID |
|---|---|---|---|---|---|---|
| Synaphobranchus kaupii | Chordata | Kaup's arrowtooth eel | Deep sea | 967 | Southwest of Taiwan (22°17.466N 119°59.652 E) | 118154 |
| Genome Assembly | Genome Size | Assembly level | Released year | WGS accession | Submitter | BioProject | BUSCO completeness | Gene Number |
|---|---|---|---|---|---|---|---|---|
| SKAU_1.1 | 1.5Gb | Chromosome | 2023 | JAINUF01 | GenoFish - INRAE (Fish Physiology and Genomics laboratory) | PRJNA743503 | 97.90% | 43,073 |
| Title | Journal | Pubmed ID |
|---|---|---|
| Genome structures resolve the early diversification of teleost fishes | Science | 36758078 |
| Gene ID | Description |
|---|---|
| SKAU_T00308510 | RING ZINC FINGER |
| SKAU_T00308520 | |
| SKAU_T00308530 | NF-E2 INDUCIBLE PROTEIN |
| SKAU_T00308540 | NF-E2 INDUCIBLE PROTEIN |
| SKAU_T00308550 | ADAM10/ADAM17 METALLOPEPTIDASE FAMILY MEMBER |
| SKAU_T00308560 | LIPASE |
| SKAU_T00308570 | SOLUTE CARRIER FAMILY 22 MEMBER |
| SKAU_T00308580 | TRANSPOSON |
| SKAU_T00308590 | |
| SKAU_T00308600 | |
| SKAU_T00308610 | SOLUTE CARRIER FAMILY 22 MEMBER |
| SKAU_T00308620 | AQUAPORIN OR AQUAGLYCEROPORIN RELATED |
| SKAU_T00308630 | ALDEHYDE DEHYDROGENASE-RELATED |
| SKAU_T00308640 | GDOWN1 |
| SKAU_T00308650 | CINGULIN-LIKE PROTEIN 1-RELATED |
| SKAU_T00308660 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR |
| SKAU_T00308670 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR |
| SKAU_T00308680 | BASIC HELIX-LOOP-HELIX TRANSCRIPTION FACTOR |
| SKAU_T00308690 | ZINC FINGER PROTEIN |
| SKAU_T00308700 | RFX TRANSCRIPTION FACTOR FAMILY |
| SKAU_T00308710 | HECT DOMAIN UBIQUITIN-PROTEIN LIGASE |
| SKAU_T00308720 | PROTEIN SIDEKICK |
| SKAU_T00308730 | CYTOKINE RECEPTOR |
| SKAU_T00308740 | DYNEIN ASSEMBLY FACTOR 4, AXONEMAL |
| SKAU_T00308750 | |
| SKAU_T00308760 | CELL CYCLE PROGRESSION PROTEIN 1 |
| SKAU_T00308770 | LD44762P |
| SKAU_T00308780 | 60S RIBOSOMAL PROTEIN L24 |
| SKAU_T00308790 | |
| SKAU_T00308800 | PROTEIN UNC-13 HOMOLOG |
| SKAU_T00308810 | |
| SKAU_T00308820 | |
| SKAU_T00308830 | |
| SKAU_T00308840 | |
| SKAU_T00308850 | LYSM AND PUTATIVE PEPTIDOGLYCAN-BINDING DOMAIN-CONTAINING PROTEIN |
| SKAU_T00308860 | SECRETOGRANIN III |
| SKAU_T00308870 | ADAPTIN, ALPHA/GAMMA/EPSILON |
| SKAU_T00308880 | TUMOR NECROSIS FACTOR INDUCED PROTEIN |
| SKAU_T00308890 | |
| SKAU_T00308900 | |
| SKAU_T00308910 | CYTOCHROME P450 FAMILY 4 |
| SKAU_T00308920 | OLFACTOMEDIN-RELATED |
| SKAU_T00308930 | RABCONNECTIN-RELATED |
| SKAU_T00308940 | |
| SKAU_T00308950 | |
| SKAU_T00308960 | |
| SKAU_T00308970 | SEMAPHORIN |
| SKAU_T00308980 | |
| SKAU_T00308990 | SODIUM/POTASSIUM/CALCIUM EXCHANGER |
| SKAU_T00309000 | RNA RECOGNITION MOTIF RRM DOMAIN CONTAINING PROTEIN |
