About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s137.g0007.t1ALANINE RACEMASE
Lsat_s137.g0008.t1PEPTIDOGLYCAN RECOGNITION PROTEIN
Lsat_s137.g0009.t1ALANINE RACEMASE
Lsat_s137.g0010.t1
Lsat_s137.g0011.t1PEPTIDOGLYCAN RECOGNITION PROTEIN
Lsat_s137.g0012.t1ALANINE RACEMASE
Lsat_s137.g0013.t1
Lsat_s137.g0014.t1FIBRONECTIN TYPE-III DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s137.g0015.t1GLYCEROPHOSPHORYL DIESTER PHOSPHODIESTERASE
Lsat_s138.g0001.t1
Lsat_s138.g0002.t1
Lsat_s138.g0003.t1ANTIGEN BSP, PUTATIVE-RELATED
Lsat_s138.g0004.t1
Lsat_s138.g0005.t1
Lsat_s138.g0006.t1
Lsat_s138.g0007.t1
Lsat_s138.g0008.t1
Lsat_s139.g0001.t1
Lsat_s139.g0002.t1
Lsat_s139.g0003.t1
Lsat_s139.g0004.t1
Lsat_s139.g0005.t1
Lsat_s139.g0006.t1
Lsat_s139.g0007.t1
Lsat_s139.g0008.t1TELOMERASE REVERSE TRANSCRIPTASE
Lsat_s139.g0009.t1LORICRIN
Lsat_s139.g0010.t1PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4
Lsat_s139.g0011.t1TUMOR ENDOTHELIAL MARKER 7 RELATED
Lsat_s139.g0012.t1TUMOR ENDOTHELIAL MARKER 7 RELATED
Lsat_s139.g0013.t1
Lsat_s139.g0014.t1
Lsat_s139.g0015.t1ADENYLATE CYCLASE TYPE 1
Lsat_s139.g0016.t1TUMOR ENDOTHELIAL MARKER 7 RELATED
Lsat_s140.g0001.t1
Lsat_s140.g0002.t1
Lsat_s140.g0003.t1
Lsat_s140.g0004.t1
Lsat_s140.g0005.t1PROTEIN-COUPLED RECEPTOR GPR1, PUTATIVE-RELATED
Lsat_s140.g0006.t1DISCS LARGE
Lsat_s140.g0007.t1
Lsat_s140.g0008.t1
Lsat_s140.g0009.t1LEUCINE RICH REPEAT FAMILY PROTEIN
Lsat_s140.g0010.t1IG(IMMUNOGLOBULIN) AND LRR(LEUCINE RICH REPEAT) DOMAINS
Lsat_s140.g0011.t1ANTIGEN BSP, PUTATIVE-RELATED
Lsat_s140.g0012.t1ANTIGEN BSP, PUTATIVE-RELATED
Lsat_s140.g0013.t1
Lsat_s140.g0014.t1
Lsat_s140.g0015.t1
Lsat_s140.g0016.t1
Lsat_s140.g0017.t1TSC22 DOMAIN FAMILY PROTEIN 1
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