About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s130.g0006.t1
Lsat_s130.g0007.t1O-METHYLTRANSFERASE-RELATED
Lsat_s130.g0008.t1RAN GTPASE-ACTIVATING PROTEIN 1
Lsat_s130.g0009.t1CYTOCHROME P450
Lsat_s130.g0010.t1CYTOCHROME P450 20A1
Lsat_s130.g0011.t1CYTOCHROME P450 20A1
Lsat_s130.g0012.t1SWIM-TYPE DOMAIN-CONTAINING PROTEIN
Lsat_s130.g0013.t1CYTOCHROME P450 20A1
Lsat_s130.g0014.t1ALADIN/ADRACALIN/AAAS
Lsat_s130.g0015.t1NEUROTRANSMITTER GATED ION CHANNEL
Lsat_s130.g0016.t1O-METHYLTRANSFERASE-RELATED
Lsat_s130.g0017.t1ANK_REP_REGION DOMAIN-CONTAINING PROTEIN-RELATED
Lsat_s130.g0018.t1SNRNA-ACTIVATING PROTEIN COMPLEX SUBUNIT 3
Lsat_s130.g0019.t1UNCHARACTERIZED
Lsat_s130.g0020.t1
Lsat_s130.g0021.t1
Lsat_s131.g0001.t1UNCHARACTERIZED
Lsat_s131.g0002.t1
Lsat_s131.g0003.t1
Lsat_s131.g0004.t1IRE1-RELATED
Lsat_s131.g0005.t1
Lsat_s131.g0006.t1YALI0E18722P
Lsat_s131.g0007.t1
Lsat_s131.g0008.t1BONE MARROW PROTEOGLYCAN
Lsat_s131.g0009.t1
Lsat_s131.g0010.t1
Lsat_s131.g0011.t1
Lsat_s131.g0012.t1
Lsat_s131.g0013.t1
Lsat_s131.g0014.t1
Lsat_s131.g0015.t1
Lsat_s131.g0016.t1
Lsat_s131.g0017.t1THAP DOMAIN PROTEIN
Lsat_s131.g0018.t1
Lsat_s132.g0001.t1
Lsat_s132.g0002.t1
Lsat_s132.g0003.t1
Lsat_s132.g0004.t1
Lsat_s132.g0005.t1
Lsat_s132.g0006.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s132.g0007.t1PARP/ZINC FINGER CCCH TYPE DOMAIN CONTAINING PROTEIN
Lsat_s132.g0008.t1BONUS, ISOFORM C-RELATED
Lsat_s132.g0009.t1PROTEIN CBG10425
Lsat_s132.g0010.t1ZINC FINGER CCHC DOMAIN-CONTAINING PROTEIN 7
Lsat_s132.g0011.t1
Lsat_s132.g0012.t1
Lsat_s132.g0013.t1
Lsat_s132.g0014.t1SIGNAL RECOGNITION PARTICLE 54K PROTEIN SRP54
Lsat_s132.g0015.t1
Lsat_s132.g0016.t1
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