About Lamellibrachia satsuma

Lamellibrachia satsuma , also known as Satsuma tubeworm, is a vestimentiferan tube worm that was discovered near a hydrothermal vent in Kagoshima Bay, Kagoshima at the depth of only 82 m the shallowest depth record for a vestimentiferan. Its symbiotic sulfur oxidizer bacteria have been characterised as ε-Proteobacteria and γ-Proteobacteria. Subspecies have been later found associated with cold seeps at Hatsushima in Sagami Bay and at the Daini Tenryu Knoll in the Nankai Trough with specimens obtained at up to 1,170 m depth.


Basic Information
SpeciesPhylumCommon NameEcosystemDepthHabitatNCBI Taxonomy ID
Lamellibrachia satsumaAnnelidatube wormsCold seep110Kagoshima Bay, Kagoshima, Japan (31_39.756ʹN, 130_48.050ʹE)104711

Genome Assembly Information
Genome AssemblyGenome SizeAssembly levelReleased yearWGS accessionSubmitterBioProjectBUSCO completenessGene Number
ASM3323900v1736MbScaffold2023BSQZ01Atmosphere and Ocean Research Institute, The University of TokyoPRJDB1419995.50%27,979

References
TitleJournalPubmed ID
Genomic and transcriptomic analyses illuminate the molecular basis of the unique lifestyle of a tubeworm, Lamellibrachia satsumaDNA Research37358253

Gene Information

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Gene IDDescription
Lsat_s126.g0012.t1
Lsat_s126.g0013.t1ORF PROTEIN-RELATED
Lsat_s126.g0014.t1SERINE/ARGININE RICH SPLICING FACTOR
Lsat_s126.g0015.t1
Lsat_s126.g0016.t1
Lsat_s126.g0017.t1KINESIN-RELATED
Lsat_s126.g0018.t1ZGC:174356
Lsat_s126.g0019.t1MITOCHONDRIAL 39S RIBOSOMAL PROTEIN L49
Lsat_s126.g0020.t1TYROSINE-PROTEIN KINASE
Lsat_s126.g0021.t1NINEIN
Lsat_s126.g0022.t1AAA-FAMILY ATPASE
Lsat_s126.g0023.t1TRNA (ADENINE(58)-N(1))-METHYLTRANSFERASE
Lsat_s126.g0024.t1HYPOXIA-INDUCIBLE FACTOR 1 ALPHA
Lsat_s126.g0025.t1TRICHOHYALIN-RELATED
Lsat_s126.g0026.t1KELCH DOMAIN-CONTAINING PROTEIN 3
Lsat_s126.g0027.t1NOP SEVEN ASSOCIATED PROTEIN 1
Lsat_s126.g0028.t1LEUCINE-RICH PPR MOTIF-CONTAINING PROTEIN, MITOCHONDRIAL
Lsat_s126.g0029.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s126.g0030.t1
Lsat_s126.g0031.t1
Lsat_s126.g0032.t1-
Lsat_s126.g0033.t1
Lsat_s126.g0034.t1PROTEIN CBG11839-RELATED
Lsat_s126.g0035.t1
Lsat_s126.g0036.t1PROTEIN SIDEKICK
Lsat_s126.g0037.t1DNA-DIRECTED RNA POLYMERASE
Lsat_s126.g0038.t1ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY
Lsat_s126.g0039.t1RHO GTPASE ACTIVATING PROTEIN 11A
Lsat_s126.g0040.t1GUANINE NUCLEOTIDE EXCHANGE FACTOR
Lsat_s126.g0041.t1DNA POLYMERASE ETA
Lsat_s126.g0042.t1APOPTOSIS-STIMULATING OF P53 PROTEIN
Lsat_s126.g0043.t1
Lsat_s126.g0044.t126S PROTEASOME REGULATORY SUBUNIT
Lsat_s127.g0001.t1PROTEIN PHOSPHATASE
Lsat_s127.g0002.t1PECANEX
Lsat_s127.g0003.t1SERINE-THREONINE PROTEIN KINASE
Lsat_s127.g0004.t1DOUBLE ZINC RIBBON AND ANKYRIN REPEAT-CONTAINING PROTEIN 1
Lsat_s127.g0005.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s127.g0006.t1USP DOMAIN-CONTAINING PROTEIN
Lsat_s127.g0007.t1MOLTING PROTEIN MLT-4
Lsat_s127.g0008.t1TRANSCRIPTION INITIATION FACTOR IIB-RELATED
Lsat_s127.g0009.t1BTB/POZ DOMAIN-CONTAINING
Lsat_s127.g0010.t1TRANSCRIPTION INITIATION FACTOR IIB-RELATED
Lsat_s127.g0011.t1SERINE/THREONINE PROTEIN PHOSPHATASE
Lsat_s127.g0012.t1KH DOMAIN CONTAINING RNA BINDING PROTEIN
Lsat_s127.g0013.t1TIGHT JUNCTION-ASSOCIATED PROTEIN 1
Lsat_s127.g0014.t1
Lsat_s127.g0015.t1PRESENILIN
Lsat_s127.g0016.t1PRESENILIN
Lsat_s127.g0017.t1INOSITOL POLYPHOSPHATE KINASE
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